NONHSAT086687
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT086687 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
938 nt |
Genomic location |
chr22-:38756404..38793450 |
Exon number |
6 |
Exons |
38756404..38756873,38757404..38757565,38765991..38766050,38776375..38776428,38776942..38776995,38793313..38793450 |
Genome context |
|
Sequence |
000001 GATTTGGCCC CGACTGCGAG CCGGACGGGA TGGTGGAGGG GCGGAGGGCG CTGCTGGGGG CCTGGGAGGC TGGATTTAGG 000080
000081 GCTGCCTGGG CGGTACCGCC CGAGGGGCAA GACCCGACAG CGGGGCGCGC GCCGCAACTC CACAGACAAA CGAATTTAAA 000160 000161 GGAGCAACCG AGGAGGCACC TGCGAAAGAA AGCCCACACA CAGGTGAATT TAAAGGAGCA GCCCTGGTGT CACCTATCAG 000240 000241 TAAAAGAATG TTAGAACGAC TTTCCAAGTT TGAAGTTGGA GATGCTGAAA ATGTTGCTTC ATATGAACTA TTTGGAGTTT 000320 000321 TCCTCGTCTT ACTGGATGTC ACTCTCGTCC TTGCCGACCT AATTTTCACT GACAGCAAAC TTTATATTCC TTTGGAGTAT 000400 000401 CGTTCTATTT CTCTAGCTAT TGCCTTATTT TTTCTCATGG ATGTTCTTCT TCGAGTATTT GTAGAAGGtt tttgatctag 000480 000481 gccctgattc ccagacagca cctttggatc cacctggagg ctaggagaac ttgccatcct gaagggaagg acacaggcct 000560 000561 ggctgttttt accatgtgat gactgtagag ccccagggcc ttcagcaaac tcatgcaata gctaaggagt ggttacagca 000640 000641 ggtcttgggc aagaccccgt gctgtgctgg cctcaggtct gacccaatgc agtcacagta gtggtggcca cagaggtgct 000720 000721 tatgtcactc aaccccaagc tttaggtgcc tcagaacaga gagagagact ctgtttgttt gggagaaagt aagggaagaa 000800 000801 aacaagagtc tctttttggt aatgcagaga attatcctgg atcttgtcca agaccattaa ggcagtaccg ctatgagtct 000880 000881 gcaagaacca gagtttagga ggcttggggt gccccctaaa gcagatagag attagatc |
Predicted Small Protein
Name | NONHSAT086687_smProtein_29:253 |
Length | 75 |
Molecular weight | 8473.6217 |
Aromaticity | 0.0540540540541 |
Instability index | 55.7648648649 |
Isoelectric point | 10.1784057617 |
Runs | 9 |
Runs residual | 0.0210283454186 |
Runs probability | 0.0385287248033 |
Amino acid sequence | MVEGRRALLGAWEAGFRAAWAVPPEGQDPTAGRAPQLHRQTNLKEQPRRHLRKKAHTQVN LKEQPWCHLSVKEC |
Secondary structure | LLHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLHHHLLLLLLLLHHHHHHHHLLLLL LLLLLEEEELLLLL |
PRMN | - |
PiMo | - |