NONHSAT087173
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT087173 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1283 nt |
Genomic location |
chr22+:44962845..44964127 |
Exon number |
1 |
Exons |
44962845..44964127 |
Genome context |
|
Sequence |
000001 CTTGAGCTTC ACCACTTGCT CCACATTCTC CACCAACTAC CGATCCCTGG GCCCTGCCCA GGCGCCCAGC TACGGCACCG 000080
000081 GCCGGTCAGC AGTGTGGCCA GCGTCTATGC AGGCACTGGG AACTCTGGTT CCAGGATCTC CGTGTCCTGC TCCACGAGCT 000160 000161 TCCGGGGCAG CATGGAGTCC GGAGGCCTGG CCGCGGGGAT GACTGGGGTC TGGCAGGAAT GGGAGGCATC CAGAACGAGG 000240 000241 AGACCATGCA AAGCCTGAAC GACTGCTGGC CTCCTACCCG GACAGAGTGA GGCACCTGGA GACCAAGAAC CGGAAGCTGG 000320 000321 AGAGCAAAAT CTGGGAGCAC CTGGAGAAGA AGGGACCCCA GGTCAGAGAC TGGAGCCATT ACTTCAAGAC CATCAGGAAC 000400 000401 CAGAGGGCTC AGAGCTTGGC AATTACTGTA GACAATGCCT GCATTGTTCT GCAGATCAAC AACACCCATC TTGCTGCTGA 000480 000481 TGACTTTAGA GTCAAGTATG AGACAGAGCT GGCCATGTGC CAGTCTGTGG AGAGCAACAT CCATGGACTC TGTAAGGTCA 000560 000561 ATGATGACAC CAACGTCACT CGGCTGCAGC TGGAGACAGA GATCAAGGCT CTCAAGGAGG AGCTGCTCTT CATGAAGAAG 000640 000641 AACCACGAAG AGGAAGTAAA AGGCCTACAA GCCCAGATTG CTAGCTCTGG GTTGACCATG GAGGTAGATC CCCAAATCTC 000720 000721 AGCACCTCGC CAAGATCATG GCAGCCATCC GGGCCCAATA TGACGAGCTG GCTTGGAAGA ACGGAGAGGA GCTGGACAAG 000800 000801 TACTTGTCTC AGCAGATTGA GGAGAGCACC ACAGTGGTCA CCACGCAGTC TGCCAAGGCT GGAGCTGCTG AGATGACGCT 000880 000881 CACAGAGCTG AGATGTACAG TCCAGTCCTT GGAGATCAAC CTGAACTCCA TGAGAAATCT GAAAGCCAGT TTGGAGAACA 000960 000961 GCGTGAGGGA GGTGAAGGCC TGCTACACCT TGCAGATGGA GCAGCTCAAC GGGATCCTGC TGCACCTGGG GTCAGAGCTG 001040 001041 GCACAGACCC AGGCAAAGGG ACAGTGCCAG GCCCAGGAGT ATGAGGCCCT GCTGAACATC AAGGTCAAGC TGGAGGCTGA 001120 001121 GATCGCCACC TACTGCCACC TGCTGGAAGA TGGCAAGGAC TTCAATCTTG GAGATGCCCT GGACAGCAGC AACTCCATGC 001200 001201 AAACCATTCC AAAGACCACC ACCCACCAGA GAGTGGATGG CAAAGTGGTG TCTGAGACCA ACGACACCAA AGTTCTGAGA 001280 001281 CAT |
Predicted Small Protein
Name | NONHSAT087173_smProtein_434:634 |
Length | 67 |
Molecular weight | 7518.7756 |
Aromaticity | 0.0606060606061 |
Instability index | 92.5878787879 |
Isoelectric point | 11.459777832 |
Runs | 13 |
Runs residual | 0.0463618218109 |
Runs probability | 0.0327340915576 |
Amino acid sequence | MPALFCRSTTPILLLMTLESSMRQSWPCASLWRATSMDSVRSMMTPTSLGCSWRQRSRLS RRSCSS |
Secondary structure | LLLEEELLLLHHHHHHHHHHLLLLLLLLHHHHHHLLLLHHHHLLLLLLLLLLEEEELLLL LEELLL |
PRMN | - |
PiMo | - |