NONHSAT087227
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT087227 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
657 nt |
Genomic location |
chr22+:45730906..45736642 |
Exon number |
4 |
Exons |
45730906..45731069,45731231..45731263,45732209..45732292,45736267..45736642 |
Genome context |
|
Sequence |
000001 GTGTCATGAA GGACATTTGT ACTCGAATTC ATGGAGTGCC ACTCCTGATG GGAGAGGAGG CCCATGACAG TGACAGTCAT 000080
000081 GCTAGTGATC GCGGACACCA CACCATGCTG CCTTTGCCAG CTGGCTCCTT CAGCGAGTCC TCGCACCAAG CCTGGGAGGT 000160 000161 AGAGATGCTG ATCGCGTGGA CAGCACCACA TTATTGGGTA ATGCATGCCA GGACTGTGCA AAGAGGAAGT TAGAAGAGAA 000240 000241 TGGAATTGAA GTTTCAAAAA AACGCACACA ATCAGATACT GATGATGCTG GAGGGTCTTG AAATCTTTAC AGTAAAACCT 000320 000321 GCAACTTGAA AACTAGCCTT CTGTAACCAC AGTGCCCAAA CGAAGAGGAA TGTATGGAGA ACTCCACGTG GATCTCTGAT 000400 000401 TGCGAAACCG TCACATACAC CAAGAGAGCC ACATGGGCAT GTGGCCCTCA AGGCTGGGTG AGAGGGCTCC CCTGTGTGTT 000480 000481 GAACTATGCA GGAGGGTGAC GCGGACACAT TTCAGGTGGA CTTTGCAAGG ACTGATGGAT AGCTACCTCA GGGACCAGAA 000560 000561 TCCGTGGGAA GGGATGGACC TGGTGTTCCC GTTCCCATCT GACAGGCTCT CTTTTGTCAA GGTGGTATTT TTCGTAATAA 000640 000641 AAGGGGAAGA GTAAAGA |
Predicted Small Protein
Name | NONHSAT087227_smProtein_5:232 |
Length | 76 |
Molecular weight | 8432.4038 |
Aromaticity | 0.0666666666667 |
Instability index | 47.068 |
Isoelectric point | 6.00018310547 |
Runs | 8 |
Runs residual | 0.0422695035461 |
Runs probability | 0.0123542660307 |
Amino acid sequence | MKDICTRIHGVPLLMGEEAHDSDSHASDRGHHTMLPLPAGSFSESSHQAWEVEMLIAWTA PHYWVMHARTVQRGS |
Secondary structure | LLLEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHL LLLLLHHHEEELLLL |
PRMN | - |
PiMo | - |