NONHSAT087245
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT087245 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
873 nt |
Genomic location |
chr22+:46068068..46114344 |
Exon number |
6 |
Exons |
46068068..46068357,46085592..46085783,46088876..46088958,46096162..46096258,46098569..46098727,46114293..46114344 |
Genome context |
|
Sequence |
000001 Tccggccggg gggctgcccc gggcagggga gggcggccgg gactcccgcg gcggccccgg cctggaccca ggcgccgccc 000080
000081 ccgccTCGCT GGAGACGCGG AGGGCGAGGC CTGCGCGGGC TGCCTGAGCG CCACCCAGGC CTCCCGACTC CCAGGCACCG 000160 000161 CCTCGTGCTC GTGGGTcccc gcggggcctg gggcgggcgc cccgcTCCCC CACCGCAGCC AGTCCGGGTG CGAAGCCGCG 000240 000241 ATCCCGGGAG CCCTTGCCGC GGCGTGCCGG TGATGTTGAC CCAACACACG AGAAACAGCA CCCAGGACTA TCTTCCAAAG 000320 000321 AGTTCTGGAT ATCCTAAAGA AATCTTCTCA TGCTGTTGAG CTTGCCTGCA GAGATCCATC CCAAGTGGAA AACCTGGCTT 000400 000401 CCAGTCTGCA GTTAATAACA GAATGCTTCA GGTGTCTTCG CAATGCTTGC ATAGAGTGTT CTGTGAACCA GAATTCAATC 000480 000481 AGGAACTTGG ATACGATTGG TGTTGCTGTT GATTTGATTC TTCTGTTTCG TGAACTGCGA GTGGAACAGG AATCTCTGTT 000560 000561 GACAGCTTTT CGCTGTGGCC TGCAGTTTTT AGGCAACATT GCCTCACGGA ATGAAGATTC CCAGTCTATT GTTTGGGTGC 000640 000641 ATGCTTTCCC AGAACTGTTT TTGTCTTGCT TAAATCATCC GGACAAAAAA ATTGTTGCCT ACTCTTCAAT GATTTTGTTT 000720 000721 ACATCCCTTA ATCATGAAAG AATGAAAGAA CTGGAGGAGA ACCTCAATAT TGCAATTGAT GTCATAGATG CTTACCAAAA 000800 000801 ACATCCTGAA TCAGAATGGC CGTTCTTGAT TATTACAGAC CTCTTTCTGA AAAGCCCGGA ATTGGTACAA GCC |
Predicted Small Protein
Name | NONHSAT087245_smProtein_422:511 |
Length | 30 |
Molecular weight | 3468.957 |
Aromaticity | 0.137931034483 |
Instability index | 57.5344827586 |
Isoelectric point | 4.39630126953 |
Runs | 6 |
Runs residual | 0.0073275862069 |
Runs probability | 0.0113937466879 |
Amino acid sequence | MLQVSSQCLHRVFCEPEFNQELGYDWCCC |
Secondary structure | LLEELHHHHHHEELLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |