NONHSAT087252
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT087252 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
699 nt |
Genomic location |
chr22+:46242570..46243268 |
Exon number |
1 |
Exons |
46242570..46243268 |
Genome context |
|
Sequence |
000001 gcagttctcc tgcctcagcc tcctgagtag ctgggattat aatttttgta tttttagtac agatggggtt tcaccatgtt 000080
000081 gccaggctgg tctcaaactc ctaacctcat gatccgccct ccttggcctc ccaaaatgct gggattacaa gcatgagcca 000160 000161 ctgcgcctgg tcTTAAAATG ATTTTTTTAC TGTCCTTTAG TTTCTGTCCT TGAATGAATA AACAAAGATG TTAGAACAAA 000240 000241 AATTCCAGTC TTTGCAGGAA GAAAACTTTT TAAAAAATCT TTCATCATCA GTAAGTTCTA CACATAAGTG CTTCACATGT 000320 000321 GAAGCAGTAG AATTGAGGCG GAATTTTTAA ATGCAGAAAA GTTGAGGAAG AACCTTAACA TTTAAGATCT AATATAAAAC 000400 000401 CAAGCCTGTG GGGTGGGGGG GAACCAAAAA AACAACAACA AAAAAACACC CTCTCGGTGC TGTCCAAGGT TCTGATCGTT 000480 000481 TCAGCCATAT TGGCTTGTCC ACATAAAATC AATTAAAAAC CTTGTTTTCA AACTTCAGAT TTTTTTTCTT GTGTTTGTAT 000560 000561 GACACAATAT CTGTTTCCTC TTTCCTACAC ACtttatata tttatttata ttttGAGGTC AAATATTATG TGATACTTTG 000640 000641 CAATATGAAT TTCATATACC ATCCACAATA TAAATGAATT TGTAAGCTTT TGCTGTAAA |
Predicted Small Protein
Name | NONHSAT087252_smProtein_227:349 |
Length | 41 |
Molecular weight | 4710.2848 |
Aromaticity | 0.1 |
Instability index | 79.6125 |
Isoelectric point | 6.53143310547 |
Runs | 8 |
Runs residual | 0.0219758064516 |
Runs probability | 0.0370296767356 |
Amino acid sequence | MLEQKFQSLQEENFLKNLSSSVSSTHKCFTCEAVELRRNF |
Secondary structure | LHHHHHHHHHHHHHHHHHLLLLLLLLLEEEEELEEHHHLL |
PRMN | - |
PiMo | - |