NONHSAT087284
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT087284 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
734 nt |
Genomic location |
chr22+:46532894..46539633 |
Exon number |
2 |
Exons |
46532894..46533675,46539339..46539633 |
Genome context |
|
Sequence |
000001 CCCAGGGCAC AGGCCCGCTT CCCCTCCAGG GCTGTACATT TGCCTTTTAG GAGCCAGAGT TGAGCAGCTC CTGGCTGGGT 000080
000081 GTTGGGAACC GTGCCCCAGG CCCATGGACA GCACAGCCAG CCTCTTGGAA GTCTCAGAAA ATGTATCACC CGTCACAGGG 000160 000161 ATGGTTTCCT GTCTCTGCAG ATACTTCACT CTCCCCTCCC CCGACTCCTC CTCCTGGGCC ATTTCCCAGA AGCGCTCATC 000240 000241 CCCATGCCCA CACGAACACA AACCTCCACG CAGCACTGAC CAAGAGCCAG GCCCTACCCC AGGACCTCAC AGATGTCACC 000320 000321 TTCGCGGTCC TTTCAGCAAC CGAATGAGGT AGGCCTATCA TTATCCCCTC TTCACAGATG GGGAAACCGA GGCACGGAGC 000400 000401 TGTGAAGTGA CTTGCCCAAG GCCCCACCGG CAGCCAGTGG CAGAGCCAGG TGCCCCCCAA GATGTTCACG CCCTAATCCT 000480 000481 CAGGATCTGC AGACATGTCA CCTTTCATGG CAAAAGGTCT TTGCAAATGT GATGAAACAT CTGAAGATGG CAAGATTCTC 000560 000561 TTAGGTGATC TCAGTGGGTC CCAGAGGGGG AACGATGAAT TGACAGTCTC CCAGCCTGTC TTCCCCACCA GCCATCCAAG 000640 000641 AACCCTGCCT GCCAGGATGC TGGTCCTGTG TCTGCCTGCC CCACGCCACC GTCACCTTGC AGAGAAACAC TGATTGCCTT 000720 000721 CACACATCTG GCTC |
Predicted Small Protein
Name | NONHSAT087284_smProtein_494:712 |
Length | 73 |
Molecular weight | 7923.1016 |
Aromaticity | 0.0277777777778 |
Instability index | 63.5402777778 |
Isoelectric point | 7.79486083984 |
Runs | 11 |
Runs residual | 0.0118613138686 |
Runs probability | 0.0300460888697 |
Amino acid sequence | MSPFMAKGLCKCDETSEDGKILLGDLSGSQRGNDELTVSQPVFPTSHPRTLPARMLVLCL PAPRHRHLAEKH |
Secondary structure | LLHHHLLLLLLLLLLLLLLLEEEELLLLLLLLLLEEEELLLLLLLLLLLLLLLLEEEEEL LLLLLHHHHLLL |
PRMN | - |
PiMo | - |