NONHSAT087303
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT087303 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1299 nt |
Genomic location |
chr22+:46638412..46639653 |
Exon number |
1 |
Exons |
46638412..46639653 |
Genome context |
|
Sequence |
000001 AGCTATATCT TAAATACTGT GATTTGACTT TTTGAAAAAT ATCCTAATAC AAATATTTTA CTAACTTACA ATCACTCATT 000080
000081 TAATAAGAAA CATTTGGATT CTTTTGAAAT CAGTGTTAAT TGACTCATAT TCTTAAAAGC CTGGCTCTTG ACCCTATTGG 000160 000161 AAACACAAAG GAAGCTGAAA TCAAACATTT AAAATACACT GCGTACACGT GTGCGTGCAC ACACACACAC ACACACACAC 000240 000241 ACACACAGCT CTTCATTTCT CCTGAGCCAT GCAGAATTTA CTTTCAATGT GGAAATCTGT TCCCTTTACC ACACTGTATA 000320 000321 TGCACAGAGC ACAAGAGAGG CTATCTCTAG TCACTTCCAC CAGCGAGGCC TTAGACTCCG TATTAGAGGC CACCGATTTC 000400 000401 ATACAACAGT GTTTCGCTAA AGACCCTTCA CTATTCTTGT TTAGTAAATA GCTGTCTGCT CTTCAGGGAA CTGTTACCTA 000480 000481 TGGGTTATTA CCAAAGAACG CTGGCAATTG GAAATGTCCT GATGGAAATT CTTTGCACGT GCCGGTTCTC TGGCATCCTC 000560 000561 CAGGTGGCCC AACCCAAAGC AGAAAGCAGA AACCACAGAC CCCGTGAGTC TCCCCATACC TTGTTTCCAA TAACTTGGCA 000640 000641 AAACTTCTTG GTGCATATTG GTTACACCCT CTGGGATTCA TAATGCCATT AGGCTAAAAC CCTAAGAGAG AGGGTTGACA 000720 000721 GAAACACACG CGAGAATGAG GCAGATCCCA GAGCAAGGAC TGGGCCCAGA CTCTCCACAT GTGCTCTACT AGTGAGTGCC 000800 000801 TTATACTCTC AGTATTTTGG GGCTTACAGC TTCTTATTTG TGCTAAAAAG GTGCAGTTCC AAAGTAGGAA CTGCCACACA 000880 000881 GGCCCCAGCA TCCTCTCTCC AACTTCATAC CTCTCTCCTG GTGGGGGGAG CGGGCATCCA GGACCTCCGG AATCAAGGAT 000960 000961 GTGCAGAGAA GAGCGAAAGT AATTTTTCTA GTCACATGAA CTGATTGGTT CCAGGCAATT AGAAAATGGC TATAAAATAA 001040 001041 CCTTAATTTT AAAAAAAAAT CTTGGGTCTT CGTTTTCCTA TTAGGAGACT GAACTGACCA CATGTATTGA TTTATATCCT 001120 001121 GAATATATGG GAACTTCTGT GTTTGGGATG TCCTACTGTA AGACTGATGA ATGTACAGAG TTAATTTCAG GGTACAGTTT 001200 001201 TCCCTTAATG GTTTTAAAAA ATAAACTATT TTTTAAAATT TTAAAAAAAA ATTTAAAAAA AAAAAAAAAA AAAAAAAAAA 001280 001281 AAAAAAAAAA AAAAAAAAA |
Predicted Small Protein
Name | NONHSAT087303_smProtein_479:682 |
Length | 68 |
Molecular weight | 7806.9392 |
Aromaticity | 0.119402985075 |
Instability index | 54.4641791045 |
Isoelectric point | 8.80364990234 |
Runs | 9 |
Runs residual | 0.00898648120653 |
Runs probability | 0.0492943924317 |
Amino acid sequence | MGYYQRTLAIGNVLMEILCTCRFSGILQVAQPKAESRNHRPRESPHTLFPITWQNFLVHI GYTLWDS |
Secondary structure | LLLLEEEHHHHHHHHHHHHHLLLLLEEEEELLLLLLLLLLLLLLLLLLLLLHHHHHHEEE EEEEELL |
PRMN | - |
PiMo | - |