NONHSAT087393

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT087393

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1647 nt

Genomic location

chr22-:49808176..50051190

Exon number

2

Exons

49808176..49809684,50051053..50051190

Genome context

Sequence
000001 cgtgtgcggt ccctccccct cacgttctct cttcctctgc tccgccatga tgagaagcgc ctgcttcccc ttccccttcc 000080
000081 gccatgattg tgtttcctga gacctcccag ccacgcttcc tgtacagcct gcagaactCT GCAAGACCTT CCTCCAAGGA 000160
000161 ACCTGCTGCC AACTCGCCTG GCACAGACAT CCTGACATGA CACCACTGCT CATTCCCCAC TGGCACAGGA CCGGCCATCT 000240
000241 CCTCCAAGCC TGAGCTGCCT GTACAGCATC CCAAGCTCTG GGCGCACCTG GGGCAGCCGT GGCAGGAACG CCGTGGGATC 000320
000321 TGCTGAGTCC TACGAGGCTG CAGTGGGACC GAGTGGGAAC CATGGCCCAT GCAGAACTGC TTCTCCCTTG AAGAAGAAAC 000400
000401 ACAGGCTATT GGCTCAGCTG TAAAAGGCAA ACACAGGCTA TTGGCTCAGC TGTAAAAGGA GATCACGGCA TCCGCTTGGA 000480
000481 TGGGGAGTTG GTGCCAGCTT TCCTGCTACA AGAAAATTCA ATCCCAACTG CTACCCAGAC CCGCTGTGTC TGCACCACAG 000560
000561 CAGTGGGGAC CGAGGGCATG CCTGCCATGC CAATCCCGCA GAGGACTTTG CTGCAGCGAG ACAGCCCCTT TCTCCCTCCA 000640
000641 TGATAGAGTT TAGAAGCCTC CTCCTCTTGC TGCCACCGTG GGTATTTAGG TGAGCAGCTG TAGTTGCCGG GGAGGCCTGA 000720
000721 GCACAACACT TAACGCTGCT CCTGCAGTTT CATGGGCCAT TAACAATTTG CTAATATTGT TTTAGCTTGC AAATTAGTGC 000800
000801 AGCTCCGTGG GTAAGGAAAG GCTCTGTGGC TGTCATCAAT CAGATGGAAA TTCTCCATGC ATGAGATGAA AAACGATTTC 000880
000881 TAGCCTTTGA GGCTCAGACG GCAATTACTG TAACCAAAAA AAATGGGTGG TGGGGAGCCG GGGGGAAGAG AGCTCCTTGC 000960
000961 AAAGTCTGTT AGCAATTCTA TGAACTTTAT TTCTTGATGC ACGAGAGTGA AACTATGAGG ATTTCCAGCC AAGGGAACTT 001040
001041 GATTTTCTTA GTTACTAATA AAGTGACAAT CTAAAGGAGC CCTCTCCAAC TGACCTGCTC CCAGAAGGTG GGGAGAGAGG 001120
001121 ATGTCCGTGT GGCAAGAAGG ATGACAAAGC TGTGAGGACC TGGTGACTGT CTTTGCTGAG CTCCCAACTG GTGACGCTCA 001200
001201 CCAGGAGGAT GCCACAGATG GCTCTGCCAA AAGTGCAGAC AAACCTTGGC CTTGTTTGTT GGAAACCATG TTGCTTATCC 001280
001281 CCCATCCCTC CCACCTTTAA GCACCAACAT TTTTTCCTTT TAAATATTGA TACGAGACTG ggctgggcat ggtggctcat 001360
001361 gcctgtagtt ctaatgcttt ggaaatctga ggcaggagaa tcacttgatc tccagttcta gaccagcctg ggcagtatag 001440
001441 tgagaacccc atctctacaa aaacatttca aaaattagct gggtgtggta gtatgcactg tggtcccagc tgcttgggag 001520
001521 gctgaggcag gaggatcact tgagcccagg agatcaaggc tgctgtgagc catgaacgcc cctctgcact ccagcctggg 001600
001601 caacagagtg agaccctgtc tcttaaaata aaaGTGAGAC TGTTATG
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Predicted Small Protein

Name NONHSAT087393_smProtein_1208:1420
Length 71
Molecular weight 8153.719
Aromaticity 0.128571428571
Instability index 56.6971428571
Isoelectric point 7.75482177734
Runs 9
Runs residual 0.0162659123055
Runs probability 0.0633084064457
Amino acid sequence MPQMALPKVQTNLGLVCWKPCCLSPIPPTFKHQHFFLLNIDTRLGWAWWLMPVVLMLWKS
EAGESLDLQF
Secondary structure LLLLLLLHHHHLLLLEEELLLLLLLLLLLLLLLEEEEEELLLLLHHHHHHHHHHHHHHHL
LLLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLL
LLLLLLLLLL
PiMo oooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiii
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