NONHSAT087475

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT087475

Source

NONCODE4.0

Same with

,

Classification

intronic(AS)

Length

3118 nt

Genomic location

chr22+:50761414..50764531

Exon number

1

Exons

50761414..50764531

Genome context

Sequence
000001 ggactacagg tgcccaccgc catgcccggc taatgctttt tttttttttt tttttttttt ttttagtaga gacggggttt 000080
000081 cactgtgtta gccagaatgg tcttgatctc ctgacctcgt gatcagcccg cctcagcctc ctaaagtgct gggattacag 000160
000161 gtgtgagcca ccacgcccgg cTTGTTTTTT GTTTTTTAAC AGACAGGGTc aacctccaac tcctggactc aagcagttct 000240
000241 cccacctcag cctcccaagt agctgagact acaggtttgt gccaccatgc ctggctcttt tttttttttt ttttcctttt 000320
000321 tgagagctgc actccagctc tgtcacccag gctggagtgc agtggcacga tctcagctca ctgcaacctc cacctcccgg 000400
000401 gttcaagcaa ttctcctaac tcagcctcca gagtagctgg gattacaggc atacaatgcc cagctaattt tttgtatttt 000480
000481 tagtagagac agggtttcac catgttgccc aggctggtct caaacttctg agctcatgca atccgcctgc ctcagcctcc 000560
000561 caaagtgcta agattatagg catgaaacac tgtgcccggc ctcattttgt attttttgta gagatgtggg ttttgctata 000640
000641 ttgaccaagc tggtctagaa ctcctgggct caagtgctcc tcccactgtg ggcttccaaa gtgctaggat tacaggcatc 000720
000721 agccagcacg cctagccTtt tttttttttt ttttttttta attttgtttt gagacaggtt cttgctgtaa cctaggctgg 000800
000801 agtgcagtgg tgatcatggc tcactacagc ctcgaattcc tgggctcaag caatcctcca gcctcagcct cctgagtagc 000880
000881 tataactaca ggtgcatgcc accacacctg gctaatttat ttttaatttt ggtagagaca gggtctcact atgtttccta 000960
000961 ggctagtctg gaacacctgg cctcaagtga tcctcctgcc tcggcctcct aaagggctgg attataggca ggaccactgc 001040
001041 gcccagccCA AGAGGTGAGT TTTCAAGAGC TGAGAAGGCG GAGCCAGGCC CTTTCCTAAG CTGACCTGTA CACTCCAGTC 001120
001121 ACCCCACAGT CCTGCCCAGC CCCTCACAAG CCAGATCCCT TGTCACCCCA CAGCCCTGCT GGCCCCTCTC AAGCTGGACC 001200
001201 CCTCATCTCT CAAGCAGGCT GCACTGCACT CATTTCCATG ATGCTCCCAT GCGTACAGTT GCGGGGGTAT CCTGTGAGGG 001280
001281 CTAAGGGGGA GTCCTGTGAG CACTATGGAC TCTGAACCAC TTACTCTCCA TATCACTGGC ACATAGtgtg aactcctaaa 001360
001361 gggcaagagc cttgtctact cacttacatg ctgggcaccA GTATTGTGGG GCTGGGCTGG TGATAGCTGC TCAATGTGAT 001440
001441 CTACGGtttt gttttttgag acagagtttc actcttgttg cccaggctgg agtgccatgg cgcgatctcg gctcaccaca 001520
001521 acctccgcct cctgggttca agcgatttgc ctgcctcagc ttcctgagta gctgggatta caggcgtgcg ccaccacgcc 001600
001601 cggctaattt tgtattttta gtagagacag ggtttctctg tgttggtcag gctggtctca aactcctgaa ctcaggtgat 001680
001681 ctgtccgcct cggcctccca aagtgctagg attacaggcg tgagccacca tgcccagccT TCAAAGTGAT TTACTGAATG 001760
001761 AGTAACTGAA TCACCAGCTC CTTGCCTTTT GCTTATGTTG GCATTTTGGG AGAGGGGTTA CCTGAAACAG GACCCCCTCC 001840
001841 CCTGTCTCTT CTCAGCATCC AAGACTTATT TACCTAAGCC CATTCCTTCC TCTGAGCTGC ATGCATCCCA ACTAGAGTCT 001920
001921 TCCTTCCATA TCGCAGAACC AAGCACAGTC CTGGGGCTTT GCAGTGCTTA GCTGGGCTGA GCTGTGACTG AGTTGCACAG 002000
002001 TGGGTGCTCC CTAAGTCTGT AAGTGACTAA AACGACCTCG ATCTTCCCTG TGACTTCCAG GTGAGGGAGG AAAGGCAAGA 002080
002081 GTCATGTGCT CAGGCCCCGG TGGATCCACT GCCAGGTTTC TGCACAGACT CAGTGATCTG CAGGTGCCCA GATCATTGCT 002160
002161 ATGGAGGGTT TCGCTCATGG ACCTGGGTCC CCAACACTCT GCCAGCTGAC CATGCCCCTA GTCCGAGCTG AGCATCCCCA 002240
002241 GCAAAAGCTC AGGAGTCCAA GCACACACAG CCTTCAACAG CTCAGAAATA ACTTTCCGAA TGGGTTTTAG AAAATAACAC 002320
002321 GAGAATGTCT TAAGGAACAG AGGAACCTCC tttttttttt tttttttttt tgagatggag tctcactttg tcgcccaagc 002400
002401 tggagcgcaa tggtgcaatc tctgctcact gcaacctccc cctcccgggt tcaagccatt ctcctcctca gtctcccgag 002480
002481 tagctaggac tacaggagtg tgccacctcg cccggctaat ttctgtattt ttagtggaga tgtggtttca ccatgttggc 002560
002561 caggatggtc tcaaactgct gaccttgtga tctgcctgcc tcggcctctc aaagtgctgg gattacaggc atgagtcacc 002640
002641 gcgtccggcc AGGAACCTCT TAACTTCTTT TGTGATTTTG TGGGGAACAA TCTGGGCAAC AGTATTGAAC TAAGAAAGGT 002720
002721 TTTCAACCCT GGGCAGGTCA CCACACTTCT TGGTACTCAG CCCCCACCCA GTGATGCTGT TTGAGGCTGT GCACCTGCTG 002800
002801 GGGACCGTGT GTGGTGGGAG GGGCTCCAGA GAGTGCTAGA GTTAATGCTT TTCTGTTTAG AAGACTATAT GCTTCtcatg 002880
002881 gcctcttgga gttcagcagg gccttagaaa gcatctccca accacagaga cgcgctgcct ggctttcctg atgatgatga 002960
002961 tttggcctga tcttggacac ctgcggtaat agagagctca ctacccctca CGAGGTTCCT TGCGCCAGCG CGGGGAAGCC 003040
003041 TCCCTCCATC TGCAGGTGGG CCTCCCCTGT GCTGGTCAGC TCCCTGGTGT GTGTTACACA GGACACAGAG AAGATCAT
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Predicted Small Protein

Name NONHSAT087475_smProtein_950:1057
Length 36
Molecular weight 4257.987
Aromaticity 0.114285714286
Instability index 51.64
Isoelectric point 10.2844848633
Runs 5
Runs residual 0.0382566585956
Runs probability 0.0455926514751
Amino acid sequence MFPRLVWNTWPQVILLPRPPKGLDYRQDHCAQPKR
Secondary structure LLLLLLLLLLLLEEELLLLLLLLLLLHHHLLLLLL
PRMN -
PiMo -