NONHSAT087535
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT087535 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2041 nt |
Genomic location |
chr22-:51174253..51176567 |
Exon number |
2 |
Exons |
51174253..51175532,51175818..51176567 |
Genome context |
|
Sequence |
000001 AGTTAGGCCA GGTAAGAGCC CCTCGCCTTA ACTGGTTTGT GCTGAAGAGA CTTCTTGACT TCCTGCATAG GCTCCCCCAC 000080
000081 CACCAGGATG ATGGGGGACT CCTGTGCAGC CCCACTCCCT CTGTCCCAAG GCCAGGATCT CCATTCCCAG TAACTCTTGC 000160 000161 GAGGTCCCCA CATCACCCAA GGCTCTGGCT TTGTGCAGGT TCAGAGTCTG CCTCTCATGC GTGCTGTGAC CACTGCAGAC 000240 000241 TCACAGACTG AGGAGCGGCT CAGCCCTTCA GTGATGAGAC GGTGCAACAT GTTTGTGGAT CAGAGGAGTC AGGGTCAGCA 000320 000321 GATTAATTGA TCCTTAATTG TTGTTGGGGA AGTTTTCTTT TCCTCTTCCA AGTGAATGCT ATCAACACAC TTTTCCAAGA 000400 000401 GTCATTTTGA ATTTTCCTAA TTTACAACTG CAAAGCCCAC CTTCCTGTCC GTTGCTGAAT ATCACAAGGT CTCCTATTAT 000480 000481 CCTGAATGTC TCCAGATCGG CTTTCTGTGA CTGAGGTGGA GCAAGGTGTT TTCTCCTATA CTTGAATGTC AAGAGTTTTC 000560 000561 ATACAGCTAC CTGAATATCA TGAAGCATCA TTTTTCCCAT CTGATCATCA GGAACTAGCA TCTCACCTAC CAGAGTGTGA 000640 000641 CAAATGCTTA TTGCAAACAC CTGAATGTTA AAACATTTCC CATCGCCTGC AAGTGTCAGG AGGTCACACT CTTACCTGCA 000720 000721 TGAGGGCAGC CTTACCTCTT CTACCTGAAT TGCCAGAGGC CCTCATCGCC TCCACCTACA GGTTAAGAAT TCTCACCTCC 000800 000801 ACCACCCAAG TGTCACCCTG TCGCACTTTC TCTACCTGAA AATCAAGAGG TCTTACATCT TCCAGCTGAA TGTCAAGAGG 000880 000881 TTGTATTTTA CCTATATGAA TGTTCTGAAG TCTCCACCGG TATACCAGAG TGTTGGGAGA TCTCATTGCC CCCATCTGGG 000960 000961 TGCCAGGGCA TGTCCTACCC TCTACTTGAA TATAGTCTCA TATCCCTGTC TAAATGGCAT GGAGCTTTCA TCTCCTCTGC 001040 001041 TAGAGTATCA TGAGATCTCC TCTATTCTGG GTGTCCAAAG TTCTCATCTC AACCCCCTGA GGTCTGGAGG TATTCTCACC 001120 001121 TCTTCCTGGT TGTCTGGAGG TCTCATCTCC CTTACCTGAG AGTCATGAAA CCTCCTATCT CCTATATGCC CTATCTAAGT 001200 001201 CATGACACTT TATCTCCTCC GAGTGTCAGG GGATTTTTCT ACCTTTATGT CAGGTAGCCC CACTTCCTCT AGCTGAAGGG 001280 001281 CATACAAGTT CTATTTCGTG ACTTGAATGT GAATAGGTTT CAGCTGCACT ACTGAGTGTT AGCGGACCTC ACTTATTTTA 001360 001361 ACTGAGCATC AAGTTGTGTC TCATAAATAA CCAGAAAAAG ACTTTGGAAA TATGGTTCAA GAAATGGCAA GAAGAATTGA 001440 001441 AGAAGTGGGC CCAAGTGCAG AGGCTCATGC CTGTAATCCC AGCACTTTGA GAGGGTGAGG CAGGCAGATC ACTTGAGCTC 001520 001521 AGGAGCCCCA GACCAGCCTG GGCAACACGG CAAAACCCCG TCTGTACAAA AAATACAAAA ATTAGCCAGG TGCAGTGGCA 001600 001601 CCTGCATCCC AGCTACTCAG GAAGCTGAGG CAGGAGAATC ATTTGAACCC AGAAGGCAGA AGTTGCAGTG AGCCGAGATC 001680 001681 GCACCATTGC ACTCAAGCTT GGGCAATGGG AGTGAAACCC TGTCTCAAAA AAAAAAAAAG AAGAAGATTA AAGTTTTGAC 001760 001761 TGTTAAAGAA AATATTATTC GGGTGTTTTT AATGGATAGC ACCTATTTCT TTACAAATAT TTAGGAGGTA TCAATAAAAA 001840 001841 AGTCTGAAGA CCCAATGTCA GTGTCTGGAT TCTAGAAGAC CATTACAGTT TGACTCCGCA AAGCTTACCC ACTTCTGATT 001920 001921 CTAGAAGGGG CTGCCAGTCA TCGTGCCTGC CCCTGGCTAT AGTGATGGTT GCGGGAAAAG TACCTGGCCC GGCCCATTTA 002000 002001 ATTTTGTCAT TAAACTAATG GAAGCAAAAA AAAAAAAAAA A |
Predicted Small Protein
Name | NONHSAT087535_smProtein_545:670 |
Length | 42 |
Molecular weight | 4777.3492 |
Aromaticity | 0.0975609756098 |
Instability index | 101.095121951 |
Isoelectric point | 4.72027587891 |
Runs | 9 |
Runs residual | 0.0435433188688 |
Runs probability | 0.0414728453944 |
Amino acid sequence | MSRVFIQLPEYHEASFFPSDHQELASHLPECDKCLLQTPEC |
Secondary structure | LLEEEELLLLHHHLLLLLLHHHHHHHLLLLLLHHHLLLLLL |
PRMN | - |
PiMo | - |