NONHSAT087554
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT087554 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
572 nt |
Genomic location |
chr3-:153782..173007 |
Exon number |
3 |
Exons |
153782..154143,157540..157620,172879..173007 |
Genome context |
|
Sequence |
000001 GGAGGGTGCA CTGATGTCTG AGTGATGTTT AACCATGCCG GTCCAGGTAC AGTGCCTGTC TCCGGAATGA TGCAGGGATC 000080
000081 CCAAAGTGGA GAGAATTAGA CCTATCGCAT TTGTGATTAG AGTGGGCAAG AAAAGCAACA AATGATCAGG AGAATTGGGG 000160 000161 GCTTACCCAG TGAGCGAAGC TTTGGCAAAA ATGTAAAGCC GTGCAGCACA atgcaagagg aggccaagga ctccctgcaa 000240 000241 aacctcaact tcaagcctaa aacagcctga aggttgaaaa actggactgc tggctccaga tgaagtccac cctttcccaa 000320 000321 ctgattcttt ctgaataatg cccacctgca cactcagagg atggggtggg gccatgcaag ctccctgccg ggaacccagc 000400 000401 ctcttgagct cctatgtggt ggggcaggag ccagttcaca ggcttccctc tcactctgct gagagttttt ctcttttcct 000480 000481 tttttttgcc caataaattc catttttctc acccttctgt gtgtccatga gcctaatctt ttctgattgt gtgacaagaa 000560 000561 cctgtatttt CC |
Predicted Small Protein
Name | NONHSAT087554_smProtein_413:529 |
Length | 39 |
Molecular weight | 4576.3489 |
Aromaticity | 0.263157894737 |
Instability index | 47.5078947368 |
Isoelectric point | 10.8599243164 |
Runs | 5 |
Runs residual | 0.0410318559557 |
Runs probability | 0.0925631513868 |
Amino acid sequence | MWWGRSQFTGFPLTLLRVFLFSFFLPNKFHFSHPSVCP |
Secondary structure | LLLLLLLLLLLLHHHHHHHHHHHLLLLLEEELLLLLLL |
PRMN | LLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLL |
PiMo | iiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooo |