NONHSAT087735

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT087735

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2147 nt

Genomic location

chr3+:8854087..8905521

Exon number

4

Exons

8854087..8854735,8859796..8860278,8883028..8883492,8904972..8905521

Genome context

Sequence
000001 CTTCATCTTT GGGTAGGGGT AAGGGAAGGG TTTATGTATG TGCCAGGCTG AGGCTCCGGA TTTGGGCAAG CAATGGTCAG 000080
000081 GCTCCACGGA GGCTCAAAGA TGGATGGTTT GAGACTTAGG GACGGATGAC AGGGAAGACC TCAGTGATGG GGTGATGTCT 000160
000161 GTTGAATGCA TTACTTGCTT TACATTTTTA AAAGCTGAAA GCTTAAGAGC TTATTTCTTA AGGCCGAGAA ACATGTTCTC 000240
000241 AGCTGCAGCA AAGCATTCTG CTCTGTCAGA TAGCCCAGAG TTGGTCCAAA ACAAAGGTGG GAAGTCGTCT GTGTTTGTGG 000320
000321 CCCCTCCCTG CCTTTCTGTG GGGCTTCCCC ACTTTCTGAT AGAGCCACCT GGCAGGTGCC CAGCAGTTCT CAACAGCCTG 000400
000401 TAGCATGGTC CTGGAGTCTC CAGCAAGCCA TCCAGGTGTC ATCAGCACTG GGCCTTGCAA CCCGGAGCCC TGCAACCCTG 000480
000481 TGGTAGAGCT GCACAGGGAT GGGGAGGATC GCGGGATTTA GAGTCAAGAG GACCTGTGTT CTGGGCCTGG GTCTTAGACA 000560
000561 AATCCCTGAT CCTGAGCCTG ATTCTTCAGC TATAAACAGC ATTTTTCATA CTTATCAGAT GGGTTTGGAG ATTGAGCAAA 000640
000641 TATGAAGGTT TTTCTCATTC CTCTCCAGCC TTCCCTTCCC TCCTCCTCAT TCGCAGCTAT CATCAGTCAT ACAGGGTTCC 000720
000721 CCAGCTGCCC AGTCTCAGCC CCCCACCTTG TTTCCATCCT AGTGTTATCA CAGTCTGTGA TTATTTTATG GGTTGTTGAC 000800
000801 TTATTTTCTG TCTCTCTGTC CCCTACGTTG TTGTAAGCTC CATAAAGGCA GGGACTTCAT TCAGGAACAT AGTCCCAGTG 000880
000881 CCTGGCACAG GGTAGTCACT CCATAAATAT TTGTTCAAGG AACCAACCAA CAAACTCACT TACATGGAGG TGATAGACCC 000960
000961 TTACTCTATT CCCTCCTGTG GTGTAACGTA AATTGCAAGA CGGAAGCCTC AGGAAAAGTA GGAATGAACT GGGAGGAGGG 001040
001041 AACTAAGATA TCCTGAGCAC TTTCTAAGGG CAAGGCACTG AGCAAAGTAA TTAAGGTACT TTATCCATGA CAATGGCCAT 001120
001121 GCATGATAGA CCATAACATC CTGCTGGTTA CTGATCATAC CTGTTGATGA ATTCCAAAAG AGCAGTTGCT ATCTCAAAGG 001200
001201 CAAGCAAGGT CATGGAGGGC AGGAAAAGCA CAACCCTGAA TGCAGAACGA GCACCACCAG GGTCTTGAAA CCTTACAAAC 001280
001281 AACTTCATAA ATCCTGCACT GGGCTTCCTT ATTGACCACA CAGGCTTCCT ATCAAACATG AATGAAGAGG AGGTGGACTG 001360
001361 TATTACAAAA TTAATAATGT AAGATGGTGG CTGCCAAAGC CATTCATAAT CGTAATTGCT TTTGCATGTG TTTTCTTGAA 001440
001441 AGCAACTTCA TATTTGTCAG CAACTAGGAA TGAAGGCGCT TCCTTTGATA CTTATATGTA CAGGCACAAA ATAGAGTTGA 001520
001521 ACTTTGCTGC ACACAATAAA TGTGTTGTGA AAATACGTGT TTGAAGTCTA ATAAACAGAC TTTTATTTTG CCCATGTGGG 001600
001601 CCAGTGGAGG CTCCCAAGAG GCTGTCCACG GGGACCATGT TAGGTCTCTT CAGGCTTCAA GGGCAAGTCT AAGGGGGGAA 001680
001681 GACCCCCATG ATGGTGTGCC CTTTTGTTCT GAAGCAGCTG CCTCCCTCTG CTTTGGTGCC AGGCACTGAA AACATTTTTC 001760
001761 TTGATTTAGG GGCCCCACTT ATACTTAACA TAGACAAGAG ATACCAGGAT GTGCTCACAT CATAGTGAGC ATACACAGCA 001840
001841 AGAACACGTA GTGTGTCCAT CAGTGTCCTC ATCACATTGC TCTCCTTGTG TTTGTTGCAA GGCTGCTGGT CTCCCTTCCA 001920
001921 GACTGAGCTC CTCATGGGCC AGGGCTGTGC TTGAGCTGTC CTTGAATTCC TAGTGTTAGA AAAGGGCACA GCCTGTGGGA 002000
002001 GCCCCGGATG AATGTGCTGG ACCAAATGGC AGAGCTAGAG TCCAAACCCT GCTCTCACTC TGTCCACACC CAGGGCTCTT 002080
002081 TCTATTCTAC TGTCAGTTCC CTGGCTGAGC AGAGCTACAG GCCCATGGGA GAGGACTGGG GAATGAC
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Predicted Small Protein

Name NONHSAT087735_smProtein_641:835
Length 65
Molecular weight 6802.0873
Aromaticity 0.078125
Instability index 71.6375
Isoelectric point 6.68585205078
Runs 11
Runs residual 0.02328125
Runs probability 0.0817475229241
Amino acid sequence MKVFLIPLQPSLPSSSFAAIISHTGFPSCPVSAPHLVSILVLSQSVIILWVVDLFSVSLS
PTLL
Secondary structure LEEEEELLLLLLLLHHHHHHHHLLLLLLLLLLLLLEEEEEEELLLEEEEEEELLEEEEEL
LLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLL
LLLL
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