NONHSAT087763
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT087763 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1735 nt |
Genomic location |
chr3-:9402364..9404098 |
Exon number |
1 |
Exons |
9402364..9404098 |
Genome context |
|
Sequence |
000001 aggcgggtgg atcacttgag gtcaggagtt tgaggccagg ctggccaaca tggtgaaact ccatctctac taaaaataca 000080
000081 aaagttagct ggatgtggtg gcctgcacct gtagtcctag ctacttggga agatgaagca gaagagttgc ttacccagga 000160 000161 ggcagaggtt gcagagagcc aagattgtgc cactgcactc cagtctggga gcaagacatc atctcaaaaa aaaaaaaaaa 000240 000241 aaaaaaaaaa aagagttgaa cctgcatggt agccattttg acagactggg aagcctagct tccagtcaga agccaaaaac 000320 000321 aggcacttcc agggttggaa gaataagaca gggatttatg ctaaacacag tggccaaata tacatgttaa ataaactgta 000400 000401 agaggggtca cgaatattta tgaaaggagc aatttgtgca tgtgcagttg agcttcatgc ctctctgtgg atcccatgtt 000480 000481 taaaaaatgg tggccttagc atgatccaag ggtagagttt tctaccgctt gacttcaaaa ggtgaagcag gggatgtgaa 000560 000561 aaccctcact gcacgtcctc tgtcgactgg ccagaaccac tccctggatg gtgggtgatc tcttatcagg aaggaatgct 000640 000641 agtcggttgt tctattgaaa ctgcaaatgg gagggtcagc atcaggctgg tggagtgagt ctttcaaaag ggctggtttc 000720 000721 tgtttaaccc ttaggaaaga aaatctaatg gcgattatag agggaggggt tataaagagg tgtgtccgac ttcccatcct 000800 000801 gtcatgagta ggaactcagc ttccaagttt tttctagggt ctccttggcc aagagagggc ctgttcagtc agttgggggg 000880 000881 catagaattt tatttttatt tttcaGTTGA CAAAAGTTAA CTTATTGTGA AAGGAACCCA ACAACAaaaa gataaaccga 000960 000961 atttaaaaca aaacaaaacc aaaaagaaca caatttataa atgtgcaaag gggctgggag tggtggttca tgcctgtagt 001040 001041 cccagcgctt tgggaggctg aggtgagtgg ctcgcttgag ctcagagttt gagactagct ctggcaacat ggcaaaactc 001120 001121 tgtcgctaca aaaaaatgac aaaaattagc taggcatggt gacactcacc tgtagtccca gctactcggg aggctgagac 001200 001201 aggagaatag cttgagctgg ggaggttgag gctgtaatga gttatgatca catcactgca cttcagccca ggtgacagag 001280 001281 tgagaccttg tctcaaaaat aaaatgaaaa atatgtaaag ggcttgaata gatatttctc caaaagatgg acaaatggcc 001360 001361 aataagcaca tgaaaagatg ctgaacatca ttagtcatta gggaattgca aattaatcac aatgggatac tcatcaaaat 001440 001441 gactaaaagt aaaaaacaaa aaatcaacag ttccaagttc taatgagtat gtggggcaat ggagcactta tacattgctg 001520 001521 atgaaaatac aaaatgatat atgccctggt atgttttagc tctgtgactc cacctaaatt tcatcttgaa gtatactccc 001600 001601 ataattccca tatattgtgg gagggaccca gtgggagatg attgaatcat gggggtgatt ccctgcatac tgttcttgtg 001680 001681 gtagtgaata agtctcacaa gatctgatgg tttgataaga ggtttccact tccgc |
Predicted Small Protein
Name | NONHSAT087763_smProtein_92:271 |
Length | 60 |
Molecular weight | 6688.5104 |
Aromaticity | 0.0677966101695 |
Instability index | 69.2016949153 |
Isoelectric point | 6.22589111328 |
Runs | 7 |
Runs residual | 0.0258124708443 |
Runs probability | 0.0436318671612 |
Amino acid sequence | MWWPAPVVLATWEDEAEELLTQEAEVAESQDCATALQSGSKTSSQKKKKKKKKRVEPAW |
Secondary structure | LLLLLLEEELLLHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLHHHHHHHHHLLLLLLLL |
PRMN | - |
PiMo | - |