NONHSAT087796
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT087796 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
667 nt |
Genomic location |
chr3+:9475169..9482191 |
Exon number |
7 |
Exons |
9475169..9475246,9475529..9475634,9476018..9476169,9476274..9476314,9476508..9476566,9477412..9477590,9482140..9482191 |
Genome context |
|
Sequence |
000001 AGATCCAATT AAGAAGAATA GTTCTGAGTC TAAACCAGCC CAGAGTGGCT TCTCTAGGGG AAACTCCCCG CTCAGCTGCC 000080
000081 CTGAATCTGT GGAGGCTAGT CCAGCAGTTA ATGAGAAGAG CGTGTATTCC ACTCATAATT ATGGGACCAC TCAGAGGCAT 000160 000161 GGGTGTCGAG GACTGCCTTA TGCTACGATC ATCCCTCGTT CTGACCTGAA TGGCCTGCCG TCGCCTGTAG AGGAACGCTG 000240 000241 TGGAGACAGC CCGAACTCTG AAGGAGAAAC TGTACCTACC TGGTGTCCTT GTGGTCTTTC TCAGGATGGC TTCCTTCTCA 000320 000321 ACTGTGACAA GTGCAGATGA TTCCTTAGTG CTCCTTGGCT CGAATTCTCT GCACTAGGGG AATGAGCAGG GGGAAGGTTA 000400 000401 TTAGACTTCA TCGGCGGAAG CAGGACAACA TATCAGGTGG GGATAGCAGT GCAACAGAAA GCTGGGATGA GGAGCTTTCT 000480 000481 CCTTCCACTG TGTTGTATAC AGCAACACAG CACACACCTA CAAGCATCAC CTTAACTGTT AGAAGAACCA AACCCAAGAA 000560 000561 GCGGAAAAAG AGTCCAGAAA AGGGTCGTGC AGCACCAAAG ACGAAGAAAA TCAAGAATTC TCCCTCTGAA GCACAGAATT 000640 000641 TAGATGAGAA TACAACTGAG GGCTGGG |
Predicted Small Protein
Name | NONHSAT087796_smProtein_110:208 |
Length | 33 |
Molecular weight | 3546.4304 |
Aromaticity | 0.0 |
Instability index | 79.234375 |
Isoelectric point | 9.00506591797 |
Runs | 7 |
Runs residual | 0.0271045918367 |
Runs probability | 0.0203396673985 |
Amino acid sequence | MRRACIPLIIMGPLRGMGVEDCLMLRSSLVLT |
Secondary structure | LLEELLLEEELLLLLLLLHHHHHHHHHHLLLL |
PRMN | - |
PiMo | - |