NONHSAT087932
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT087932 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
728 nt |
Genomic location |
chr3-:10327497..10331491 |
Exon number |
5 |
Exons |
10327497..10327578,10328388..10328496,10328712..10329010,10329709..10329900,10331446..10331491 |
Genome context |
|
Sequence |
000001 AGATGGAGGT CAAGCAGAAG GGGCAGAGGA TGAACTGGAA GTCCGGtttc agagtagaag actttggaga ccaagtccca 000080
000081 ctcccattga acagatgggc cactgaggcc aggagggAAG CTGCCCCCCA CCAGCCAGCA CTGTGTCACC ACTCACTTGC 000160 000161 CTGCACCACA GCGCCAGGTG TTAGGCCAGG CCAGCAGTTT CCCAGACCGG TGCTCCTGTT TCCTAAGATG TCTGCCAGGC 000240 000241 ATCAAAGAAA GGTCTATGCA TATGAGAGAA AAAATACCTA GGGAAGGAGA AAAAGGAGAA GAAACAGACA AGAGAGAAAG 000320 000321 GAGAAAGAGC TGGGAGCAGG GAAGGAATAG AAGGCCAGCA GGCCAGTGCT GAGAATGCTG GGCAGACCCC CTGCCAGGGC 000400 000401 CTGAAATGCT GCCATTGGTG ACTCAACCTT TTGTCTTCAA AACTGCAAGG GAGAAAAAAA ATCTCACACT AGGGGGCACC 000480 000481 ACAGCTTTTA TCAGCAATCC CATTAGAGGC TAAGGCTGAG AGGCATGAGA GTGCAAGTTC AACGCCCCCT TTGATGTTGG 000560 000561 AATCAAGCTG TCAGGGGTTC AGTACCAGCA GCACAGCCAG GCCCTGGGGA AGTTTCTTCA GGACATCCTC TGGGAAGAGG 000640 000641 CCAAAGAGGC CCCAGCCGAC AAGTGATCGC CCACAAGCCT TACTCACCTC TCTCTAAGTT TAGAAGCGCT CATCTGGCTT 000720 000721 TTCGCTTG |
Predicted Small Protein
Name | NONHSAT087932_smProtein_2:280 |
Length | 93 |
Molecular weight | 10638.129 |
Aromaticity | 0.0869565217391 |
Instability index | 68.3119565217 |
Isoelectric point | 10.4248657227 |
Runs | 14 |
Runs residual | 0.0169690334689 |
Runs probability | 0.0425215131098 |
Amino acid sequence | MEVKQKGQRMNWKSGFRVEDFGDQVPLPLNRWATEARREAAPHQPALCHHSLACTTAPGV RPGQQFPRPVLLFPKMSARHQRKVYAYERKNT |
Secondary structure | LEEEELLLEELLLLLEEEELLLLLLLLLLLLHHHHHHHHHLLLLLLLLLLLLLLLLLLLL LLLLLLLLLEEELLLLLHHHHHHEEEEEELLL |
PRMN | - |
PiMo | - |