NONHSAT088365
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT088365 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
559 nt |
Genomic location |
chr3-:14962822..14965605 |
Exon number |
4 |
Exons |
14962822..14962966,14963808..14963911,14964598..14964785,14965484..14965605 |
Genome context |
|
Sequence |
000001 GTCGAGGGGT TAATGCTCTG GAAGACGGAT GAAAAGGCAC TGCCCGAGAA GCGGGGTGAA GACAGCGGGA AGCTCATGCT 000080
000081 CACAGGCCGC TCTGTAACTG AAAGAAGCCA CATGGAAGGG AGGGAAAGCG GTTTCAGGCA TGAACCATGG ACCACAGAGA 000160 000161 AGCCACTGGA GCCTGGGGAG AAGCCACCAG GCCACTTGGA AGAAGGCAAG TGGTCCCCAG GTTACCTCTC ATCAGGCCCG 000240 000241 GGACAGCCCT GCCCCGCTTC TTCAGCTCCC CGAAGCAGCC GTCGCAGACC TTGGCCATCC TGTCCTTCAG CAACAGAATT 000320 000321 GGCTGAGTAA TGTGGAATGT GGCCAGGAGA CCAGCCAGAT GCAGAGCCCA GTGAGCCCTG CCCTGCGTCT CTGTGCAGGG 000400 000401 TGTGTGATGT GTGGCTTCCC AGACAGTCAT CCAACAGGCA CTTTCCAAGT CCCTGCTCTG CACCAGGGAG GGCTTCCTGA 000480 000481 GTGGCAAGAG CTACGCCTGG GCTGGGTGCC AGCTAGCTGG GTGAAGTTCT CACAGTGTCC ACTAGATGCC GCGCCTACA |
Predicted Small Protein
Name | NONHSAT088365_smProtein_146:325 |
Length | 60 |
Molecular weight | 6540.4803 |
Aromaticity | 0.0677966101695 |
Instability index | 55.7152542373 |
Isoelectric point | 12.0021362305 |
Runs | 7 |
Runs residual | 0.0258124708443 |
Runs probability | 0.0462437227143 |
Amino acid sequence | MDHREATGAWGEATRPLGRRQVVPRLPLIRPGTALPRFFSSPKQPSQTLAILSFSNRIG |
Secondary structure | LLHHHLLLLLLLLLLLLLLLEELLLLLLLLLLLLLLLLLLLLLLLLLEEEEEEELLLLL |
PRMN | - |
PiMo | - |