NONHSAT088373

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT088373

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3821 nt

Genomic location

chr3-:14984435..14989214

Exon number

2

Exons

14984435..14987661,14988621..14989214

Genome context

Sequence
000001 ggcgccgccg gggtcgcgga gaagggggGG TTTGTTATTG TTTTTGTCAG TGAAAGGTCA GAGTTCGTGA CCCCGGTgcc 000080
000081 gccgccgccg ccgcccgcgc gcTGGTAGGA GGAGGGCGAA TGTTCTTCTT CCTCTTCCCA GCGCCAGCCT cgccgccgcg 000160
000161 gcggggggcg ggcgAGAACG CGATTGGCTG AGGCGCGCGC GCGCACCGGA ACGCCGCAGC CGGCGCTCGG TCCATCCGGC 000240
000241 CCGTGGGCTG Tggggccccg ggcggcggcg gcTACGTAGC TGCCGCCGGC CTTGGCCGCG GCCGGGCGGG CGGATATGTG 000320
000321 GCTTAAATGG CGCAGGCGTC GGGGCCTAGA GGCTGAAGGG CTGGTCGTCC TAAAAACTCG TGGACGTCGC GCACGGTTAC 000400
000401 CCGGACGCAG GCCCGCCCCT CTGGGGAACC GCGAGCTCCT CGCAGCTGGG TGGGGACCGT CCTCGCAGTG GCGGCCTCCA 000480
000481 CCCTGCCTTC TCGCTTAGCC AAGGCTTCTG GAAGGCTCGC AAAGTGTCTG TTGTTGGAAG AAGCCGGGCC CTGACTGGCG 000560
000561 CGACGGATTC TCCCAGCCGC TCAGCAGAGC GTCTaatatg ctttttgtct aatgatgtta gataaaaagc aaatttggag 000640
000641 cagttttctt attcgagttc aaaatggttc ataaagcagc gaagacaact caaaacatca gtaacacatt tggcccagga 000720
000721 actgctaaca aacatacagt gcagtggtgg cttaagaagt tttgcaagga agagagcctt gaagatgagg aacgtgatat 000800
000801 gggccatggg aagttgacaa cgaccaattg agagcaatca ttgaactaca tgaaaaatta cagaagaact cagcgttgac 000880
000881 tattctacgg tcattagggt cgttcagcat tcgaagcaaa ttggaaaggt gaaaaagctt gataagtggg tgcctcatga 000960
000961 gctgagcgga aatcaaaact atcgttttga agtgtagtct tcttttatgc tacgcaacaa caaaccattt ctcaatcgga 001040
001041 ttgtgacatg taatgaaaag tgaattttat acaacaacca gctcagtggt tggaccaaga ggcagctcca aagcagttcc 001120
001121 caaagccaaa cttgcaccaa aaaaaaggtc atggtcactg ttcggtggtc tgctgcccat ctgatccact acagttttct 001200
001201 gaatcctggt gaaaccatta catctgagaa gtatgctcag caaattggta agatgcaccg aaaactgcaa tacctgctgc 001280
001281 ctgcattggt caacagaaag ggcccaattc ttctccacga caacacctga ctgcgtgtcg cacaaccagt gcttcaaaag 001360
001361 ttgaaggaat tgggctacaa agttttgcct catccaccat attcacctga cctttcgcca actgactacc acttctgcta 001440
001441 gcatcttgac aactttttgc agggaaaaca cttcagcatg gtgcagaaaa tgctttccaa gagttcgtca aatcctgaag 001520
001521 cacggatttt tatgctacag gaataaacaa acatttctca ttggcaaaaa tgtgttgatt gtaatggttc ctgttttgat 001600
001601 taatagaata tgttttagcg tagttacaat gatttaaaat tcgcagtctg gaaatttaat ttttgcatca acctaaTATT 001680
001681 TCTATGGTAA ATCCTTGCAA ACATGGAAAC AATGCATTTG GCCCAGTGCT TTGTGGTTGT GTACTCTttt tctttgtttt 001760
001761 tttaatagat ggcattggcc gggcatggtg gctcatgcct gtaatcccag cattttggga aggtgaggtg ggtggatcac 001840
001841 ctgaggtcag gagttcaaga ccagcctgac taacatggta aaaccccatc tctactaaaa atacaaaaaa attagctagg 001920
001921 cggggtggcg ggcatctaat tccagctact tcatgaggct gcgacaggag aatcatttga actcgggagg cagaggttgc 002000
002001 agtgagccga gatcacacca ttgcactcca gcctgggcga tgagcgaaac tgtctcaaaa aaaaaaaaag ttggggtctc 002080
002081 gctgtgttga ccaggctggt ctcgaactcc tggcctcaag tgatcctccc atcttggcct cccaaagtgt taggattaca 002160
002161 ggcgtgagcc accacaccct gccTGGTTGT GTACTCTTTT AAATACTAAG TTTTTAATGT TAAATGCTGC TTTTAGATAC 002240
002241 ACTGTAAAAA TACACCTATC AATGAGTTTT TTTATTAAAA ACATTGCAAT TGTACTAGAC TTTAAATACT AAGCAATAAT 002320
002321 TCAGGCTTCA ATGTTGGttt atagttttct catttctttc atttaatacc tctgtaaaat gaagcagtta cttccatttt 002400
002401 cctgaggtga gataagtgcc ctgcacaatg ttataggccc agtaagtgag actggagctc tgatctaatc cctttgacat 002480
002481 taaagtttgt gcagtaaacc agctatgtca GTTTGCCACA TTTGTAATAG TGTTCAATAA ATTTTCACTT AAAGGTTTAA 002560
002561 TATTAAAGTA GTAGCAAGAA TTCATAACCT TAATTGGCTT TAACAGCTTT TCTTTCCCTG AAAACAGATG CATATGTACA 002640
002641 CATGCACACA GATTGCTTAC AATATCAGCA CGTAAAAGGC CTTTGCACAT TGAAGTCGGC ACTGCTTTGG TGCCTTTTTT 002720
002721 GTTTTTTGGC TCGGTGTTTT GACTGCAAGT CTTTTTGGAT AGAATTTTAT AGTTAGAAAG TAGCTAACAC TTGGGTTTTA 002800
002801 TAGGCACAAA AAACAAGTCT TATACTAGCT GTACTTTATT TTTTGAGTTC TTATTAATGA GGAACATCCA CTTTTGCATT 002880
002881 GACAGTGATT TCAAGATTGC TTTATCAGCC TTTAAAGGAT TCTTGACTAG TCGTGCACAT CAGAACTGCC AGGTccccag 002960
002961 tggttctgaa gcagtaagct ttgggtgggc tctggcatca gcactttcac taagcttcac agataattct gatgcatact 003040
003041 ccaggcctga accactgATC AATTTGAAAC ATGCATAACA AAGCAAAAAA AGTTTTGTTT CACCTTTTGA AATACAGTTA 003120
003121 ACTCTTTTAC CATGCCAGAG ATCATTCAGA GAGACAGGTC GTTGCTCCGG AGTGATACAG ATCTGGCAGT ACCCAGCCCT 003200
003201 TGTGTGTGTG CGTTAGCTCA GCACCTGCCC ACACTGCGAG CCCCCGTAgg atgtgccttg tccttccctg tttcagcact 003280
003281 taacacacta cctggtacag agtatgtagt gggcatctgt tgaatgaatg CTTTTCCCAG TAGCAGTGTA TTCATACAAT 003360
003361 ATTAATATAA TTGTCCCCTG GCTTACAGAT AAAAATGAAA GCATCAAGTG CCCAGTGAGT GAGACCCAGG TGTTCTTCCT 003440
003441 CCACCCCTAG TGGTCCCCTG GGCAGGTCTT TTTTTTTTTG TAACACTCAC CAGTCTGTTC TGTAGTCAAT CATTGATTGA 003520
003521 CTTGTCTGTG AACTTGGAGG AACTGTTTCA TAGTTTCATT AGCACAGAGT AAACATGTTT GCCATGCAAG GTTATTTTGC 003600
003601 ATCTGCATTT AAGTGATAAT GTTGAATCAA TGAAAAGTGT TGATTAAGCA GTAGTTGTAG ATATGCTAAG TTTTTCAAAT 003680
003681 TACTAATATC AAGTGGAGAT TGTTTTTACT TTTAAGGGTA TTGCTTTTGT GATAGCATAA ATAATGGTTT TCCTTTTTTG 003760
003761 TAATGTAAAT TAATTGCTGG CAACTTTTGT ATTCCCATAG ACTGGGGAAG CTTAATTGCC T
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Predicted Small Protein

Name NONHSAT088373_smProtein_3131:3322
Length 64
Molecular weight 6677.7702
Aromaticity 0.031746031746
Instability index 64.4698412698
Isoelectric point 5.49713134766
Runs 11
Runs residual 0.0296404275996
Runs probability 0.0457436045671
Amino acid sequence MPEIIQRDRSLLRSDTDLAVPSPCVCALAQHLPTLRAPVGCALSFPVSALNTLPGTEYVV
GIC
Secondary structure LLLEELLLHHHHLLLLLLLLLLHHHHHHHLLLLLLLLLLLEEELLLLLLLLLLLLLEEEE
EEL
PRMN -
PiMo -