NONHSAT088491
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT088491 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
830 nt |
Genomic location |
chr3+:15773759..15774911 |
Exon number |
2 |
Exons |
15773759..15774386,15774710..15774911 |
Genome context |
|
Sequence |
000001 GCACAGTCTT CTATCACCCA GGGAATTAAA TTAAATTCAC TGCAGAACAC AGTTGGGATG TGTTCACTGA AAGCAGAGGC 000080
000081 ATACATACAC AGGGTGGCAG AACCGCTGCT GGCCAAGGTG AAGGGGCCAG AGCTGTATGT GGAGAGGTGG AAGATGCTTC 000160 000161 ATGAGCTAAA TCCCAATCCC AGGGGAGCTG GTAAGACCAT GGTCAACTCA GTGTTCATGA CAGACACACT TAACCTTATC 000240 000241 TGCTATTTGG TGAGAGCAGG ACACGCAAAA GTGTGTTGTG AGGTATGGGG GAGAACATAT GGTATTGGTC CCTGCAGTCG 000320 000321 CGGCAGTCAA CAGATCCTTC AGCAAAGGGA CATCAACTAC TATTACCTCA TACTATGCCA CAGTTAACAA CCCTAGATCA 000400 000401 AGTTTGGCAT ATACTTCATT CTGAAACAAA TGTTTCCTCT CATGCCTTTG ACAGAAGAGA GGCATTGGAT TCTCGATGAA 000480 000481 GCCAGGAAAA TTCTGTTGAA AACGTCTGGA GGCACGTTTT TTCCCATTTG AGGGGAAGAA AGTTTATTTT TACAAACAAG 000560 000561 CCCAAATCCT TGTAACAGAT ATGTGGAAAG TATTAGAAGA AAAAGGAGAT GGCTGCTTTA AGACATCTAT GTTTGCTAAC 000640 000641 TACAGATTAC TTCAGGTTCT TGCTCACCAT GGACCTCTGA AATACTCTTA CGAACTACTG AAGAACCTTT TCGAAGGAGA 000720 000721 AATACTGTCA TATGGGGATA AGCAAGAGTG GGAAAATCAG CATGCTCACT TTGGTTGTGG TGAGCTGATC TGGGATTGCC 000800 000801 TTCTGAGGCT TATTGAAAAG GGAACGAAAA |
Predicted Small Protein
Name | NONHSAT088491_smProtein_284:478 |
Length | 65 |
Molecular weight | 7455.1962 |
Aromaticity | 0.078125 |
Instability index | 83.9296875 |
Isoelectric point | 6.14556884766 |
Runs | 10 |
Runs residual | 0.00765625 |
Runs probability | 0.0357092386505 |
Amino acid sequence | MGENIWYWSLQSRQSTDPSAKGHQLLLPHTMPQLTTLDQVWHILHSETNVSSHAFDRREA LDSR |
Secondary structure | LLLLEEEEELLLLLLLLLLLLLLEEELLLLLLLLLLLLHHHHEEELLLLLLLLHHHHHHH HLLL |
PRMN | - |
PiMo | - |