NONHSAT088508

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT088508

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1178 nt

Genomic location

chr3-:16301417..16306284

Exon number

3

Exons

16301417..16302336,16305662..16305736,16306102..16306284

Genome context

Sequence
000001 ATCACCAAGG TAACTTCAGG GTCCCGCCCG GCGGTTCACC CAAGCAAGCG CAGTTTGGTT CCGCCCGTTC CTTCCATCAT 000080
000081 TGGGTAGCCT TTGCTGCGCT GTGTCACCCA CGCCCTCTTT CCCGTTGCTG AATCTTCCTC CTCCCGCGTC CCCCCACCCC 000160
000161 AACTAATGCC CTGAGCTCTC TCGGAAGATT TGGAGAATGG GGAAGACGTG GCAACGTGTC CTAGCTGCTC TCTCATTATA 000240
000241 AAAGTGATTT ATGACAAAGA TCAGTTTGTG TGTGGAGAAA CAGTCCCAGC CCCTTCAGCC AACAAAGAAT TAGTTAAATG 000320
000321 CTGAAGAAGC CTTCAGGAAT CCAAATCCTG AACATTTGGA ATGAGCCCAG ATAGAAATAT CGAATGCAAA GCTACTGGCT 000400
000401 TCACAGAGAC AACCATTTAT GATTTGCTGT TCTGTAAGAG TGTGGATTCT TTCTATCAAC TGCTGATATC ATCTTCAGGA 000480
000481 AGCAAGTCCA TAACATGACA TATCTGGATT TTGTGCTTAG AACCTTAAAT TGGAAGCATT CTTAATTATG CATCTAAATT 000560
000561 TAAAAGAAGA TAATTTCAAA ACAGTGCTTT CTTTCCCTTG GTTTCATCAT TTTCATATCT TAAACCAAAT TACTTCGGTA 000640
000641 TCTGACAACA GCATCATCTA CCTCAGTCAT TAGGATTTCT TAATAAAAAA GAGATTGTAT TTTTGACTTG GTTATTAAGA 000720
000721 TTATTAAAAT TAGCCCTTCC TTTGAAATAT GACATCAGCT TTGCTGTTCT AAATTTAAAA TTAGTTGCTT CATCAGTACC 000800
000801 ACACTTCCAG TTTCTATACC AAGCCAGTCT CCTCAGTTTT CCCATTAGAA TGGACATGTT CTGTTCAGCG TGTCATTTCT 000880
000881 GTAATGCTTC ATGCAGAGAG TTTGGTCATA GTATTAAAGA GAAAATACAG TGAGGTCACA ATGTCTCCAG AGCTAAAAGT 000960
000961 TAGTGAACAA GAAAGAAAGT CCAAAATGAA GTGATGAAAG AATGAGGACT TTTCTTATAT TCTGCATATT CCTTGGAAGT 001040
001041 CAGGACAAGA TGAAAAGAAA AACATCCAAA AGAAGTGAAA TTGGTGACAG AATGAGAGGA GCAAAGCATA CCAGTGTAGT 001120
001121 AAGTGGAATG TTTGAATGAC TTTGCCAGGT CAGAGCAAGT AATATTTCTG TATCTGAG
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Predicted Small Protein

Name NONHSAT088508_smProtein_1001:1138
Length 46
Molecular weight 5212.13
Aromaticity 0.0888888888889
Instability index 48.7755555556
Isoelectric point 10.5317993164
Runs 9
Runs residual 0.0377525252525
Runs probability 0.0160454572219
Amino acid sequence MRTFLIFCIFLGSQDKMKRKTSKRSEIGDRMRGAKHTSVVSGMFE
Secondary structure LEEEEEEEEEELLLHHHHHHLLLLLLLLLLLLLLLLLEEEELEEL
PRMN -
PiMo -