NONHSAT088567

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT088567

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1582 nt

Genomic location

chr3+:18503767..18505831

Exon number

2

Exons

18503767..18505295,18505779..18505831

Genome context

Sequence
000001 aaatatctat gctatctttt aaaaattata tgagtagata gaaaatttca acagactact attaactgtg ataaagaatc 000080
000081 aaatggaaat tccagaactg aaaaattaac tgaaattaaa aactcaatag ttggatataa gagcagatta gaaattcttg 000160
000161 aagaacaaac ttatgagcaa tagaaattTT GAtgttaata cctaacaaag tcagaaaagg tgtattggaa aatggtttct 000240
000241 ctcatgtaac tggtgacatg taaacctata taccactttt tggaaatact ttgataatgt gaattcacta tttgaacaaa 000320
000321 aaaatttata tcttttaacc cagtaatctt atctctggga atgtgccata ggaaataagt ttttaaatcc acagtgcctc 000400
000401 atgtatgaag atattcacta cagacttatg atagTAATAa ctatctacag acaatgttta aatactttat ttcaattaat 000480
000481 gcaggttaat cctcacaaca atctatggtg ctagtgaaca ttactatcct cattgtacag atgagaaaac tgaaacattg 000560
000561 agaagtcaag taacttgctc aagattatat agctagtgca tagaggggca aagatttgaa ccagattgcc tggttccaca 000640
000641 tgcactttaa cctgctttat tTAGGCTTTT GAAAGCAACC TAAATAGCTA ACATTGACTA AATAAGTGCA GTATACCTGG 000720
000721 TCTGTGTGAC ATTTTGCAGG TATTAAAAAG TGAACATTCT GAACCCTTTT AGCAATATGG CAAATACTTC TGATGTGatg 000800
000801 tatgcatata aatatgatcg aaagcaaata tcccaaaagg ttgatggcag ttatgtcagg ttagtagcac aatagtttct 000880
000881 tttctcattt tctcacattt ttagtaATGT GTGTTGCCTA TATTAAAAAA CAAATATTAA AAagtagtag catgtattag 000960
000961 atcagagcat gggctcagac tgcctgtgtc atctcttatt agatgtatga ccagggacaa gttattgacc ttttgtttct 001040
001041 aagtctctaa gtttatcctg taaaatgaag ataattgtag taactaccta ataacatgat tgtaaggatt aaattattta 001120
001121 gaacaCTATT TGTTACTTGG AAAATATGCA ATCATAAGCT ATTTTGTTGT TATTGTTATT TTACTACCAA AGCTTATTGT 001200
001201 TTCAGAGCCC CTAGGTGACC AGGCAAAATG GCAGTTCCTT CCAGCTGGTC CTCAGATGGG CACATCTATT AGTAAGTTTC 001280
001281 ATTTCTGTAT TTGGATCTTT ATTCATCCTT ATTATGAATT CCCCAATACT GAGGTTTCTA GGAACCTACC TGCCATTGGC 001360
001361 TGAAGGGTTG CTTCTGAATT CTTTCCCAGA GGCAGTGACA AAAATCAAAC ATCCGATGTG TTCTTTACCT TTCAGTAAGC 001440
001441 TCAGCCTCCC TGCTTGTGTC ACATCTCTAA ACATACGTAC ATGCGTGATT GAAACTGTCT ATTGAAAGCA ATATTACATT 001520
001521 AACATTATCG CCTCTGCTCT TGTAAGAAGT TAGCTGCAGA ACCCACATGT GAATCCTTGT AG
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Predicted Small Protein

Name NONHSAT088567_smProtein_1313:1504
Length 64
Molecular weight 6953.28
Aromaticity 0.0793650793651
Instability index 51.6253968254
Isoelectric point 8.58966064453
Runs 11
Runs residual 0.0296404275996
Runs probability 0.0259832024538
Amino acid sequence MNSPILRFLGTYLPLAEGLLLNSFPEAVTKIKHPMCSLPFSKLSLPACVTSLNIRTCVIE
TVY
Secondary structure LLLHHHHHHLLLLHHHHHHHHLLLHHHHHHLLLLLLLLLLLLLLLLLEEELLLLEEEEEE
EEL
PRMN -
PiMo -