NONHSAT088647
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT088647 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
972 nt |
Genomic location |
chr3-:21606094..22414684 |
Exon number |
5 |
Exons |
21606094..21606176,21706378..21706520,22210309..22210527,22413941..22414328,22414546..22414684 |
Genome context |
|
Sequence |
000001 TGCAGTAGCT TCACCAGATT TCGTTGCGTC TGCTGTCCAA GATTGTTGAG GTTAGCGTTA TTTATAGTTA AATATGAGAG 000080
000081 TTGAGAGTGT GGGGGAAGTT GTTGTCTGGT ACTGCACCCA AACCAGGAGG ATAAAGGAGG CCGCGGGCCC CTCCCTTCGC 000160 000161 GCGGGCTCGC ACCTCTCCCC AGCCTGGTGC ACCTGGGCTG ACGCCGGCTC GGGACTCGTG CGGAGCGCCG CGAGCGCGGC 000240 000241 GGAGGCAGAG GCGCGCTGAC TGCCACCTCC AGCCCGTGCC GGAGGGACAG CACGCGCTGC GCAACGGAGA CCGTTCTCCT 000320 000321 TGGCCGCCGC TCACGGCTCG CGGCGACCAC CGCCGTTGAA GCTGCAGGCG GGCAGCCGTG CGTCTCCCGG GACAGCCAGC 000400 000401 CCCGGCGGCT GCTCCTCCCG GATGCCAGGG CCAGGGCGCC GGGCGGCCGC CAGCAGGAGA ATGAAGAGCT CGGTGGGAGG 000480 000481 AAGGAGAGAA AAGCTCCTGG GGGCGCCGAA AGCTCAGCCC AGCCGCGATT TCACCTGTGT ACACGATGGC GAGAGTGAGG 000560 000561 CTGAATTAAT ACCTGATGAC TTTGAAGAAA AACCAGAAAG AGAAAAGAAA CATACCAACT TTACTTTGTG CAATGTATGT 000640 000641 AACATTCAGC TGAATTCAGC CGCTCAAGCA CAAATCCACT ACAATGGCAA ATCACATCAA AAGAGATTAA AACAACTCAG 000720 000721 CAATGGGACG CTGAAAAATG ACAATGGTGG TACATGCCAG AGTCCTGCTC TCCCGGCCCT TGTCCGTCCA CCAGCCCCTC 000800 000801 CTTTGCAACC ATCGCTGGAT ATTAAACCAT TTCTTCCCTT TCCTCTTGAC ACTGCAGCTG CAGTCAACCT CTTCCCCAAT 000880 000881 TTCAATGCGA TGGACCCGAT TCAGAAAGCT GTAATAAACC ATACATTCGG GGTTCCTCTT CCCCACCGAA GAAAGCAAAT 000960 000961 CATATCATGC AA |
Predicted Small Protein
Name | NONHSAT088647_smProtein_737:913 |
Length | 59 |
Molecular weight | 6956.2886 |
Aromaticity | 0.103448275862 |
Instability index | 71.5775862069 |
Isoelectric point | 12.3027954102 |
Runs | 9 |
Runs residual | 0.0014209928003 |
Runs probability | 0.0384109599796 |
Amino acid sequence | MTMVVHARVLLSRPLSVHQPLLCNHRWILNHFFPFLLTLQLQSTSSPISMRWTRFRKL |
Secondary structure | LEEEEEEEEEELLLLLLLLHHHHLLHHHHHHHHHHHHHLLLLLLLLLLLLLEEEEEEL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL |
PiMo | oooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiii |