NONHSAT088710
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT088710 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
545 nt |
Genomic location |
chr3-:25424599..25426409 |
Exon number |
2 |
Exons |
25424599..25424870,25426137..25426409 |
Genome context |
|
Sequence |
000001 ATTATTAGCT GGCTATGAAG GAAAGAAATG CACTTAATTG GGTAAACAGT TTATTTCTTA TCTTCTTTTA AGCTTTCTGA 000080
000081 ACGAACAGAA TTTGGCTAGC TGGTTTTCTA CCCTTGAAAG CATAAAGAAG CTTGGACTGT CTGAAAATAC TCTTTTCTGG 000160 000161 GAGTATGTTC GTAGACAACT GAAATAAACT GCAACTCACT GGTGCCAAAT ATATCACACA TCAGCCCACC TCCTGCCACG 000240 000241 GTGAGCTTGT AGCAGAGAAA AGAATGTTCT CAGGTTCAGA AAGGGGCTTC CCTGCTGAGG AGCCATGCTC TTTCCACGAT 000320 000321 GAAGAACTAG AGACCGTCTT GTGCAGTGGG CTGGCAGAGA GGAGCCGCAC AGTGAAGTGT AAATTGCTCA GGATCACAAT 000400 000401 TCAGAGGACA TGGGTTCTCA CCTTGGCTCT ATGACTCATT TTGTGCCTTT CACCCCTACA ATCTCTCCGA ACCTCAGTCT 000480 000481 CTGAATGAAT GAAATGAGAC TGACCAAACC AATCTGGCTA AATATAAAGG TATAACATCC TGATC |
Predicted Small Protein
Name | NONHSAT088710_smProtein_263:433 |
Length | 57 |
Molecular weight | 6356.2913 |
Aromaticity | 0.0714285714286 |
Instability index | 40.8535714286 |
Isoelectric point | 5.70538330078 |
Runs | 7 |
Runs residual | 0.0282982045277 |
Runs probability | 0.0278345572464 |
Amino acid sequence | MFSGSERGFPAEEPCSFHDEELETVLCSGLAERSRTVKCKLLRITIQRTWVLTLAL |
Secondary structure | LLLLLLLLLLLLLLLLLLHHHHHHHHHHLLLEEEEEEEEEEEEEEEELLEELLLLL |
PRMN | - |
PiMo | - |