NONHSAT088925
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT088925 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
633 nt |
Genomic location |
chr3-:33438074..33441759 |
Exon number |
2 |
Exons |
33438074..33438627,33441681..33441759 |
Genome context |
|
Sequence |
000001 GCTACGATCC AGGAAACACA GCAATGGCTG CTCAAAAACA GATTCTCTTC CTACACAAGA CTGTTCTCTA ATTTTTCAGG 000080
000081 TGCCGACTTA TTAAAACTGA CAAAGGAGGA TTTAGTTCAA ATTTGTGGTG CAGCCGATGG AATTCGGCTC TATAATTCAC 000160 000161 TGAAGTCAAG GTAAAATACT GTGAACTGTT TTGCTTGAAA TAAGAATGTA CCTTTCTTCG CGTGGGGAAT TTGGGCAGAA 000240 000241 TGTGTTTCCA CGCTAGGTTG GCGTGTGTGC CTGTGTGCGC CATCGAGCAT TGGCAGCATT GTGCTCACAA GAAGACTGTT 000320 000321 TTGTGTACAC CTTCAGGGCA GGCCCAGATA TGATGCAGGC ACTGATGAGG GCAGAGGTAG ACTGTAAGAC TGGTAGAAAT 000400 000401 GCACATGGGC AGTACTGATT TCTTGAAGAC GACTGGGTTT GTTGCCAAGA AAACAAAACT TCTAATTTAG GTGAGCTATA 000480 000481 CAGAATCTAT GGTTTTCAAG GTCATGACTA TTACTAAACA GTTATTAAAA ATGTAAACTA ATTGTGAATT AAAATGACAG 000560 000561 AAACTGTAAA TTGTGCTGGC TTGTAAGAAC CATTTACTAT CATTGCTCTT TCTATACTTG TGGTGTGAGA ATT |
Predicted Small Protein
Name | NONHSAT088925_smProtein_239:352 |
Length | 38 |
Molecular weight | 4118.8783 |
Aromaticity | 0.0540540540541 |
Instability index | 57.1594594595 |
Isoelectric point | 8.40020751953 |
Runs | 7 |
Runs residual | 0.009422266303 |
Runs probability | 0.0482751659223 |
Amino acid sequence | MCFHARLACVPVCAIEHWQHCAHKKTVLCTPSGQAQI |
Secondary structure | LLEEEEELLLLHHHHHHHHHHHLLLLEEELLLLLLLL |
PRMN | - |
PiMo | - |