NONHSAT088929
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT088929 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1659 nt |
Genomic location |
chr3+:33488087..33495643 |
Exon number |
2 |
Exons |
33488087..33488629,33494528..33495643 |
Genome context |
|
Sequence |
000001 GCCTGAGCCA GCAGTGGCAA CCCGCTCGGG TCCCCTTCCA CACTGTGGAA GCTTTGTTCT TTAGCTCTTT GCAATAAATC 000080
000081 TTGCTGCTGC TCACTCTTTG GGTCCACACT GCCTTTACGA GCTGTAACAC TCACCGCGAA GGTCTGCAGC TTCACTCCTG 000160 000161 AAGCCAGTGA GACCACGAAC CCACCAGGAG GAACAAACAA CTCCAGATGT GCTGCCTTAA GAGCTGTAAC ACTCACCGCG 000240 000241 AAGGTCTGCA GCTTCAGTCC TAAGCCAGCA AGACCACGAA CCCACCAGAA GGAAGAAACT CTGAACACAT CCAAACATCA 000320 000321 GAAGGAACAA ACTCTGGACA TGCCGCCTTT AAGAACTGTG ACACTCACCA CGAGGGTCCG TGGCTTCATT CTTGAAGTCA 000400 000401 GTGAGACCAA GAACCCACCA ATTCCAGACA CATTTTGGCA ACCACAAAGG GACTATCACC TATTGCCAAG CGGTGAGACT 000480 000481 ATCGCCAAGT GGTGAGACCA TCGTCTATCG CTGAGCAGCA AAACAATCGC CTATCGCCAA GCAAATCGAA GCCATCAAGC 000560 000561 TACAGATGGT CTTACAAATG GAACCCCAAA TGAGTTCAAC TAACAACTTC TACCGAGGAC CCCTGGACCG ACCCGCTGGC 000640 000641 ACTTCCACTG GCCTAGAGAG TTCCCCCTTG GAGGACACTA CAACTGCAGG GCCCCTTCTT CACTTCTATC CAGCAGGAAG 000720 000721 TAGCTAGAGC AGTCATCGGC CAAATTCCCA ACAGCAGTTG GGGTGTCCTG TTTAGAGGGG GGATTGAGAG GTGGCAGTGT 000800 000801 GCTGGCAGCC CTCGCAGCCC TCGCTCACTC TTGGCTCCTC CTCGGCCTTG GCGCCCACTC TGGCCATGCT TAAGGAGCCC 000880 000881 TTCAGCCTGC CACTGCACTG TGGGAACACT GGCCAAGGCC AGAGCCAGCT CACTCAGCTT GTGGGGAAGT GTGGAGGGAG 000960 000961 AGGCGCAGGC GGGAACTGGG GCTGCATGCG GCGCTTGCGG GCCAGCGTGA GTTCCGGGTG GTTGTGGGCT TGGCGGGCCC 001040 001041 CAGACTCGGA GCGGCTGGCC TGCCCTGCTG GCCCCAGGCA GTGAGGGGCT TAGCACCCAG GCCAGCAGCT GTGGATGGTG 001120 001121 CGCTGAGTCT CCCAGCAGTG CTGGCCCACC CCACCAGCAC TGCACTCGAT TTCTCGCCAG GCCTTAGCTG CCTCCCCGCA 001200 001201 GGGCAGGCCT TGGGACCTGC AGCCCACCAT GCCTGAGTCT CCCCTGCTGC CGCCGTGGGC TCCTGCGTGG CCCAAGCCTC 001280 001281 CCCGACGAGC ACTGCCCCCT GCTCCCCGGT GCCTGGTCCC ATCGACCGCC CAAGGGCTGA GGAGTGCAGG TGCATGGTGC 001360 001361 GGGACTGGCA GGCAGCTCCA CCTGCGGCCC CAGTGCAGGA AGCCAGCTGG GCTCCTGAGT CTGGTGGGGA CTTGGAGAAT 001440 001441 TTTTATGTCT AGCTAAGGGA TTGTAAATAC ACCAATCAGC ACTCTGTATC TAGCTCAAGG ATTGTAAATA CACCAATCAG 001520 001521 CACCCTGTGT CTAGCTCAGG GTTTGTCAAT GCACCAATCG GCACTCTGTA TCTAGTTAAT CTGGTGGGGA GTTGGAGAAT 001600 001601 CTTTATGTCT AGCTAAGGGA TTGTAAATAC ACCAATCAGC ACTCTGTATC TAGCTCAAG |
Predicted Small Protein
Name | NONHSAT088929_smProtein_206:262 |
Length | 19 |
Molecular weight | 2051.3949 |
Aromaticity | 0.0 |
Instability index | 89.4555555556 |
Isoelectric point | 7.75408935547 |
Runs | 5 |
Runs residual | 0.0116959064327 |
Runs probability | 0.0376435258789 |
Amino acid sequence | MCCLKSCNTHREGLQLQS |
Secondary structure | LEELLLLLLHHHHLLLLL |
PRMN | - |
PiMo | - |