NONHSAT089064

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT089064

Source

NONCODE4.0

Same with

,

Classification

sense

Length

612 nt

Genomic location

chr3+:38278152..38292903

Exon number

6

Exons

38278152..38278452,38284234..38284269,38287566..38287712,38289159..38289223,38291457..38291509,38292894..38292903

Genome context

Sequence
000001 GAGATTGTCA ACAGAGAGCA GGTGATGGTT GGAGGATATG AATTTGTATG GGAACATTTA TGGGGAAAAT GATTATCTAC 000080
000081 TTAATGGATT GAAGTGATAG AAGAAGAGAG AAATATGGAG TTTTCTACTT AGTAAGCATG AAATACCACC ATAACCCACT 000160
000161 TCTCTTTCTA ATGAGCAGGT TCGGAGAGTA CCAGGTTCCA GTGGGCGTCT TCATAAGACA GAGGATGGAG GCTGGGAGTG 000240
000241 GAGTGATGAT GAATTTGATG AAGAAAGTGA GGAAGGGAAA GCAGCAATTT CACAACTCAG GTCTCCCCGA GTGAAAGAAT 000320
000321 CAATATCAAA TTCTGAGCTC TTTCCAACAA CTGATCCTGT GGGTACTTTG CTCCAAGTTC CAGAACAGAT CTCTGCTCAT 000400
000401 CTACCTCAGC CAGCTGGGCA GATTGCTACA CAGCCAACTC AAGTCTCTCT CCCACCCACC GCAGAGCCAG CAAAAACAGC 000480
000481 TCAGGCTTTG TCTTCAGGAT CAGGTTCACA AGAAACCAAG ATCCCAATCA GTCTAGTACT AAGATTAAGG AATTCCAAAA 000560
000561 AAGAACTAAA TGATATTCGA TTTGAATTTA CTCCTGGGAG AGATACAGCA GA
[back to top]

Predicted Small Protein

Name NONHSAT089064_smProtein_137:313
Length 59
Molecular weight 6779.9855
Aromaticity 0.103448275862
Instability index 43.9448275862
Isoelectric point 10.3705444336
Runs 11
Runs residual 0.0330617658204
Runs probability 0.0428289251818
Amino acid sequence MKYHHNPLLFLMSRFGEYQVPVGVFIRQRMEAGSGVMMNLMKKVRKGKQQFHNSGLPE
Secondary structure LLLLLLHHHHHHHHLLEEELLEEEEEEELLLLLLHHHHHHHHHHHHLLLLEELLLLLL
PRMN -
PiMo -