NONHSAT089064
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT089064 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
612 nt |
Genomic location |
chr3+:38278152..38292903 |
Exon number |
6 |
Exons |
38278152..38278452,38284234..38284269,38287566..38287712,38289159..38289223,38291457..38291509,38292894..38292903 |
Genome context |
|
Sequence |
000001 GAGATTGTCA ACAGAGAGCA GGTGATGGTT GGAGGATATG AATTTGTATG GGAACATTTA TGGGGAAAAT GATTATCTAC 000080
000081 TTAATGGATT GAAGTGATAG AAGAAGAGAG AAATATGGAG TTTTCTACTT AGTAAGCATG AAATACCACC ATAACCCACT 000160 000161 TCTCTTTCTA ATGAGCAGGT TCGGAGAGTA CCAGGTTCCA GTGGGCGTCT TCATAAGACA GAGGATGGAG GCTGGGAGTG 000240 000241 GAGTGATGAT GAATTTGATG AAGAAAGTGA GGAAGGGAAA GCAGCAATTT CACAACTCAG GTCTCCCCGA GTGAAAGAAT 000320 000321 CAATATCAAA TTCTGAGCTC TTTCCAACAA CTGATCCTGT GGGTACTTTG CTCCAAGTTC CAGAACAGAT CTCTGCTCAT 000400 000401 CTACCTCAGC CAGCTGGGCA GATTGCTACA CAGCCAACTC AAGTCTCTCT CCCACCCACC GCAGAGCCAG CAAAAACAGC 000480 000481 TCAGGCTTTG TCTTCAGGAT CAGGTTCACA AGAAACCAAG ATCCCAATCA GTCTAGTACT AAGATTAAGG AATTCCAAAA 000560 000561 AAGAACTAAA TGATATTCGA TTTGAATTTA CTCCTGGGAG AGATACAGCA GA |
Predicted Small Protein
Name | NONHSAT089064_smProtein_137:313 |
Length | 59 |
Molecular weight | 6779.9855 |
Aromaticity | 0.103448275862 |
Instability index | 43.9448275862 |
Isoelectric point | 10.3705444336 |
Runs | 11 |
Runs residual | 0.0330617658204 |
Runs probability | 0.0428289251818 |
Amino acid sequence | MKYHHNPLLFLMSRFGEYQVPVGVFIRQRMEAGSGVMMNLMKKVRKGKQQFHNSGLPE |
Secondary structure | LLLLLLHHHHHHHHLLEEELLEEEEEEELLLLLLHHHHHHHHHHHHLLLLEELLLLLL |
PRMN | - |
PiMo | - |