NONHSAT089162
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT089162 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
788 nt |
Genomic location |
chr3+:40498794..40500107 |
Exon number |
2 |
Exons |
40498794..40498854,40499381..40500107 |
Genome context |
|
Sequence |
000001 CTTCTACACA TGCGCAGGGT TGGGCGGGTC TTCTTCCTTC TCGCCTAACG CCGCCAACAT GGTGTTCAGG CGCTTCGTGG 000080
000081 AGGTTGGCCG GGTGGCCTAT GTCTCCTTTG GACCTCATGC CGGAAAATTG GTCGCGATTG TAGATGTTAT TGATCAGAAC 000160 000161 AGGGTAAGTG TCACAACTTT TTACTAAACA TGGCAGTGGA CATGTGCCCT GCAGATGGCA ATAATGAATT GTCTCGATGG 000240 000241 CTGTGTAAGA TGAGGATGCT ATGGGTAGTC GCTTTATTTT ACCATTGAGG AAACAGGTAA TGGTACGGGT TTTAAGCACA 000320 000321 GCCTGAAGTT AGCTATTAGT ATTGAATTTC AGTATTAGCC ACTTAAGCTA GAGCCAGTTA TAGGCTGAAA CGTTGGTTAG 000400 000401 TTttaaatga gttactatac gtaaagtgag tttagaacag atccagcacg tagaaagcac tTTTGTATTT ACTGCTGTGT 000480 000481 ATTTGAAACA AGCAAACTAA GGAGTTGACC ACTGACTATA AATCAGCAGG GATCAGAGTC CTAAAGTTGC CTGTAAATTA 000560 000561 CATGTGGTTG GTTTCTATGG GGTACTATAT AGTTTAAGAA GGAGCATTTA ATGATGTGGA GAAATGTTTG TGTTGAGCAA 000640 000641 AAGACATACA TATATATAAC CCAGATAGGA CAATCCTTGT CTTTTCTGAG CAATTTATTA AAATAGTAGT GTGGGTTTGA 000720 000721 TGGCCCTGAA CGGATAAGTA ATGTTACAGA ACCATCTGAC CATTTTAATT GCTGTTAGAT TTTGCACT |
Predicted Small Protein
Name | NONHSAT089162_smProtein_260:325 |
Length | 22 |
Molecular weight | 2402.966 |
Aromaticity | 0.047619047619 |
Instability index | 53.8761904762 |
Isoelectric point | 12.3042602539 |
Runs | 6 |
Runs residual | 0.0394557823129 |
Runs probability | 0.0289701466172 |
Amino acid sequence | MGSRFILPLRKQVMVRVLSTA |
Secondary structure | LLLEEELLHHHEEEEEEELLL |
PRMN | - |
PiMo | - |