NONHSAT089372
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT089372 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
941 nt |
Genomic location |
chr3-:44767175..44771036 |
Exon number |
2 |
Exons |
44767175..44767362,44770284..44771036 |
Genome context |
|
Sequence |
000001 GCTTCCGCTC GGTGGTTCCT TCCCGCACGC AGCTACGGGT TTCGGTGCTG CGCCGGTTAA GCCGGCACCA GAAACAACCT 000080
000081 GCGACCCCAC CTGGCGTGCG TCTTCCAGCA CAGGGAAACG GGATGGAAGT CAGAAGGGTC GACCACAAGG AGCTCTTACT 000160 000161 GTGCATCAGT TCATCCTGCA AGTCCGCCAC ATTTAGCTTC CTATGTTACT GTCCTTTGGG GATTCTCAAG GCTTTTCACA 000240 000241 AAACTGGCTT CCACCTTCCT CACACACATC CTCATCTGGA AGAAAACTGA CCTCTTCACA GAAACCCCTG ACACCTTACT 000320 000321 GACCCAGGAT CTTTGTTCAG gtggccaaaa gaaaaagttc tgcaggccag gcgcggtggc tcactcctgt aatcccagca 000400 000401 ctttgggagg ccgaggcggg cggatcacct gaggtcagga gttcaagacc agcctgccca acatggagaa accctgtctc 000480 000481 tactaaaaat acaaaaatca gccgggtgtg ctggtgggcg cctgtaattc cagctactcc ggaggctgag gcgcgagaat 000560 000561 cacttgaacc tgggaggggg aggttgcagt gagcagagac tgagccactg cactccagct tgggtgatag agtgagactc 000640 000641 tgtctcaaaa acaaaacaaa acaaatcaaa cactgctttg ggctcaaatc cctgattctc agtgtatgaa ctttgcaact 000720 000721 ttacctctct gtgcctgctt cctcacttac cagGGAAAGT TTCAGAACTG TTGCTCCTGG CAGACACTTC GTGGACACGC 000800 000801 ATACTCACCA TGCCTCCTTC CTGCTGACAA CTGGGGACTT AAGTCACAAC CTGCAGACTA GCACAGAGAA ATGTCTGACT 000880 000881 CTTCAGTTGA Gttcaacaaa tgcttattga gcacctccta agtaccaggc actgttgata c |
Predicted Small Protein
Name | NONHSAT089372_smProtein_122:289 |
Length | 56 |
Molecular weight | 6323.3339 |
Aromaticity | 0.0909090909091 |
Instability index | 51.1927272727 |
Isoelectric point | 7.76177978516 |
Runs | 10 |
Runs residual | 0.030303030303 |
Runs probability | 0.0564387917329 |
Amino acid sequence | MEVRRVDHKELLLCISSSCKSATFSFLCYCPLGILKAFHKTGFHLPHTHPHLEEN |
Secondary structure | LEEEELLLHHHEEEEELLLLLLLEEEEEELLHHHHHHHHHLLLLLLLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooooooooooo |