NONHSAT089413
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT089413 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1025 nt |
Genomic location |
chr3-:45791119..45792143 |
Exon number |
1 |
Exons |
45791119..45792143 |
Genome context |
|
Sequence |
000001 GACACTTCAA AAACAAGCAA AACGAAACAA TACAGATATT ACATATACAT TATATAGATA TTATGTATCT AGGGATACAT 000080
000081 ACTATGTACT AAACTAGGAA GAAATGCAAG GCTAGTGGTC ATCTGTGGGA AGAGGTAGGG ATGGCAGTGG GAAGGAGACC 000160 000161 ATGGGCTTCC AAGGTGCAAG TTCTGTTCTC CCCAGTCATG ATCCAGATGC CCAAAAGCAT ACAGAGGGAA ACAGTAAAGC 000240 000241 TTTAGATTGA GGTGGAATAT TGAATTCTTA CAAGCTAGGT GCCTTTCCCA ACACTCCTTC CAAAGAAGGA AACATAGCCA 000320 000321 GGAGTTAAGG ATAATAGCAG AGTTGTGCCC TGGCTCTGGG GAGCTCAACT AGCTGCCTTG GATAGGGTGT TCATGGTACA 000400 000401 CCTGCTGTGT CTATGTCCCT CCTCTCCCTC CTTCATCCTT CCGTCCCCCT CTTTCTTTCT CGGGCTAATT TGCTACACAG 000480 000481 CATTAGATAA CCAGAACACC TAGGTCCTAG CATAAGCCCC ACCTCCTCCA GGAAGCCACC TGACTCCCTC CAGCAACAGC 000560 000561 TCTGCACTTT ACCTTTGTAT TCTCTCCTTT CTGACTATGG TCAGCAGACT TCTAAGACGG CCCCCAAAGA TTGCCACCTG 000640 000641 GTATTCATGT GCTCGTGTTA TCTCCTCCTC TTGAATAAGC TGGACCTAGT GACTTCTAGT GCACAGAAAT GTGGTGAAAG 000720 000721 TGATGGGATA ACAATTTCCA GATTAAGTTA TAAAAGACAC TGTGGGCTGG GTGCGGTGGC TCACGCCTGT AATCCCAGCA 000800 000801 CTTTGGGAGG CTGAGGCGGG TAGATCACCT GACGTCAGGA GTTCAAGACC AGCCTGGCCA AGATGGTGAA ACCCCGTCTC 000880 000881 TACTAAAAAT AGAAAAATTA TCTGGGCATG GTGGCAGGAG CCTGTAATCC CAGCTACTTG GGAGGCTGAG GCAGGAGAAT 000960 000961 CGCTTGAACC TGGGAGGCGG AGGTTGCAGC GAGCAGAGAT CACGCCATCG CACTCCAGCC TGGGG |
Predicted Small Protein
Name | NONHSAT089413_smProtein_392:502 |
Length | 37 |
Molecular weight | 3943.6294 |
Aromaticity | 0.111111111111 |
Instability index | 75.4722222222 |
Isoelectric point | 5.05999755859 |
Runs | 9 |
Runs residual | 0.0695415695416 |
Runs probability | 0.0282635576753 |
Amino acid sequence | MVHLLCLCPSSPSFILPSPSFFLGLICYTALDNQNT |
Secondary structure | LEEEEEELLLLLLEELLLLHHHHHHLHHHHHHLLLL |
PRMN | LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLL |
PiMo | ooooooooooooTTTTTTTTTTTTTTTTTTiiiiii |