NONHSAT089446
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT089446 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
561 nt |
Genomic location |
chr3-:46592598..46607724 |
Exon number |
2 |
Exons |
46592598..46593100,46607667..46607724 |
Genome context |
|
Sequence |
000001 CGGTGTAAAC AGCCGCGGCG GGCAGGCCAG GACTGTCAGT GCCCGCCCCT CGGGGCAGGT AATTTCATGC TCCCAAAATG 000080
000081 GGACATAAAG TGGTTGTCTT CGACATTTCT GTCATCAGAG CCTTGTGGGA AACTCGTGTC AAGAAGCACA AAGCTTGGCA 000160 000161 GAAGAAGGAG GTGGAAAGGC TTGAGAAGAG CGCCTTGGAG AAGTACGTGT TTTCTCAACC TAGTCTTGTA GCTTGTTTGG 000240 000241 TGAATAAGGA TTTGGACAGG CAACAGTTGC GTTGTGGAGG AGGATGCTTT TCTTCTGGGA TTTCTCACTG TTGGTAAAAT 000320 000321 TTTCCTCATT AAACTTCAGA GCCTTACACT GTTGCTCAGT ACAAATACGC AGTTCCTATG ATAGCAACAC CCATGGTTAT 000400 000401 AAGGACCTAC CCACCACCCT TGTGGTAGGC ACGAGGAAGA CCGAGATGAC ACGATAAATC CCCCCACAGT AAATGCTGTA 000480 000481 GCAGGCTGCC TAGCTAGAGT TCACTGAGCT AACTCACTAG GCTGTCTGGC GCTCTGGACA CCATCTGACT GCCATCTGGG 000560 000561 G |
Predicted Small Protein
Name | NONHSAT089446_smProtein_77:316 |
Length | 80 |
Molecular weight | 9089.5392 |
Aromaticity | 0.0886075949367 |
Instability index | 51.1443037975 |
Isoelectric point | 9.42193603516 |
Runs | 12 |
Runs residual | 0.0116178255592 |
Runs probability | 0.0427191897781 |
Amino acid sequence | MGHKVVVFDISVIRALWETRVKKHKAWQKKEVERLEKSALEKYVFSQPSLVACLVNKDLD RQQLRCGGGCFSSGISHCW |
Secondary structure | LLLEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLEEEEEEELLLL HHHHHLLLLEELLLLEEEL |
PRMN | - |
PiMo | - |