NONHSAT089552
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT089552 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
866 nt |
Genomic location |
chr3-:48335649..48342828 |
Exon number |
3 |
Exons |
48335649..48336293,48336565..48336725,48342769..48342828 |
Genome context |
|
Sequence |
000001 GGACTTCTGC TGCACTGGGG CTCCGAATGA CCCAGAATCT GGGGTGGGCT TAGGCCCCGG CGGGCCAATC CGAGCCTACA 000080
000081 TCCTTGCCCA CAAGGATGCC ATCCAGCTCT GGAGGACGCT CATGGGACCC ACCAGAGTGT TCCGAGCACG CCATGTGGCC 000160 000161 CCAGATTCTA TCCGTGGGAG TTTCGGCCTC ACTGACACCC GCAACACCAC CCATGGTTCG GACTCTGTGG TTTCAGCCAG 000240 000241 CAGAGAGATT GCAGCCTTCT TCCCTGACTT CAGTGAACAG CGCTGGTATG AGGAGGAAGA GCCCCAGTTG CGCTGTGGCC 000320 000321 CTGTGTGCTA TAGCCCAGAG GGAGGTGTCC ACTATGTAGC TGGAACAGGA GGCCTAGGAC CAGCCTGATG CAGGTCTATG 000400 000401 AAGACCAGTG GTAGTGCCCA GACTTCTCCT AGACATCTAG TCTAAAACAT TCTCCTAGGA CCAGGGAAGC CTGGCTTACA 000480 000481 GTGCCATTTC TGCTGGGCAC CACCACCTGC CTGAGGGCCT AGCTCACCAC AGCACATCCT CCAGGATCTA GCCTTCTATC 000560 000561 TACCTCTTCT CTGGAATGTT TATGGTGGTT CAGAAGAATG ATGACTCCTC TTTGCTGAGA ACTGTTCATC CTTCTTCAAG 000640 000641 AAGAAGCTTG CCAggccggg cacggtggct cacgcctata atcccagcac tttgggaggc cgaggcaggc ggatcacaag 000720 000721 gtcaggaatt cgagaccagc ctgaccaaca tggtgaaacc ccatctctac taaaaataca acaattagcc aggcatggtg 000800 000801 gtgcatgcct gtaatcccag ctactcagag gctgaggcag gagaattgct tgaacctggg aggcag |
Predicted Small Protein
Name | NONHSAT089552_smProtein_95:358 |
Length | 88 |
Molecular weight | 9300.6002 |
Aromaticity | 0.0459770114943 |
Instability index | 79.9344827586 |
Isoelectric point | 8.68182373047 |
Runs | 13 |
Runs residual | 0.0111658456486 |
Runs probability | 0.0414509532158 |
Amino acid sequence | MPSSSGGRSWDPPECSEHAMWPQILSVGVSASLTPATPPMVRTLWFQPAERLQPSSLTSV NSAGMRRKSPSCAVALCAIAQREVSTM |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLEEEEELEEEELLLLLLLLEEEEELLLLLLLLLLLLLEE LLLLLEELLHHHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |