NONHSAT089673
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT089673 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
576 nt |
Genomic location |
chr3-:49161392..49162056 |
Exon number |
2 |
Exons |
49161392..49161533,49161623..49162056 |
Genome context |
|
Sequence |
000001 GGTTGGCACA GGCTGCACAT GCAACCTGCT GGGCACAAAT CCGCAGCAGT GCCCATCTCC TGACCAGTGC CACTGTGATC 000080
000081 CAAGCAGTGG GCAGTGCCCA TGCCTCCCCA ATGTCCAGGG CCCTAGCTGT GACCGCTGTG CCCCCAACTT CTGGAACCTC 000160 000161 ACCAGTGGCC ATGGTTGCCA GCCTTGTGCC TGCCACCCAA GCCGGGCCAG AGGCCCCACC TGCAACGAGG TATGGGACCC 000240 000241 TCCTGCAGAT CCCTGGTTAG ATGGGGCCAG GTGTCTGTCT TATCTCCAGG GCTTAGCCTC TTATAGAGGC TCTGACCCTG 000320 000321 CCTTGTTCCC ACCCCAGTTC ACAGGGCAGT GCCACTGCCG TGCCGGCTTT GGAGGGCGGA CTTGTTCTGA GTGCCAAGAG 000400 000401 CTCCACTGGG GAGACCCTGG GTTGCAGTGC CATGCCTGTG ATTGTGACTC TCGTGGAATA GATACACCTC AGTGTCACCG 000480 000481 CTTCACAGGT CACTGCAGCT GCCGCCCAGG GGTGTCTGGT GTGCGCTGTG ACCAGTGTGC CCGTGGCTTC TCAGGAATCT 000560 000561 TTCCTGCCTG CCATCC |
Predicted Small Protein
Name | NONHSAT089673_smProtein_110:259 |
Length | 50 |
Molecular weight | 4802.5278 |
Aromaticity | 0.0204081632653 |
Instability index | 62.7102040816 |
Isoelectric point | 8.49615478516 |
Runs | 8 |
Runs residual | 0.00121345835632 |
Runs probability | 0.0435214626391 |
Amino acid sequence | MSRALAVTAVPPTSGTSPVAMVASLVPATQAGPEAPPATRYGTLLQIPG |
Secondary structure | LLLEEEEELLLLLLLLLHHHHEEEELLLLLLLLLLLLLLLLLEEEELLL |
PRMN | - |
PiMo | - |