NONHSAT089909

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT089909

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2284 nt

Genomic location

chr3+:52312868..52315151

Exon number

1

Exons

52312868..52315151

Genome context

Sequence
000001 CTTGCGCGGG ATTGCAACCC CCGCGAAGAC TCTGGCGCCT CCTGCAGGCG TCCCGATCGC AGGCTGCGTG GGAGGGGGTA 000080
000081 CTGCAGGGTC GGGTATGCTG CTGGAGGCCG GTTTTGGGGG TGACTCAGGT GAGCCGCTCG CAGGCAAGCT TGACCGCTAG 000160
000161 TCCACCGCAG CGTCCGCTTA GACAGCTTCG ACCTCTTTAC TTTTTTTTTT TTTTTTGGAG ATGGAGTCTC TCGCTcaggc 000240
000241 gcgcgccacc acgcccagct aattttgtat ttttggtaga gacgggggtt caccatgttg gccaggctgg tctcgaactc 000320
000321 ctgacctcac ccgcacccgg cctcGTTTTc ttaatcgagg tagactttag gtacagtaaa aatcagcctt tttaggccgg 000400
000401 gcgcggtggc tcacgccttt aaacccacca ctttgggagg ccgaggcggg atgatcgctt gagctcagga gttgagacca 000480
000481 gcctggccaa catgacaaaa ccccacctct actaaaatac aaaaaattag ccgggcatga tggcgcggct gaggcacgag 000560
000561 aattgagaaa ggcggaggct gcagtgcgcc gaaatcgtgc cactgcattc caggctgggc gacagagcag acggtttccc 000640
000641 cccaaaaatt agccttttta gtggctagtt ttatgttctg acacccatac acagtcatgc agtcaccacc acattcaaga 000720
000721 tttggaagag ttgcactatc cTGTTTGTAG TCAACAGGAT TATTTTAAAG GTTCTATCAT ATAAGTGATT ATTTGCCTTA 000800
000801 AAAGAAAGTT TATCTCTAAC AAAGGAAAGC AGTATTTGAA CAGAAAATAG GAACCAAGCT TCCTAACCTT AACTTTCTGG 000880
000881 GCAAGGGGTT AAACTCAATG CCAACCTATG TGGCTTCACA GATCTGTATC TTGTGTGAAG CTCCTCAAAA GGTTAATTGC 000960
000961 CTGGGGTTTC CAACAATGAA GATGGGGATT ATTTATTTTT GCTTTCTTTA GCTAAAGAGA AACAAAAACG AGGAAAGGCT 001040
001041 GTGAGACATT TCAGTCGCTA TTAGGAAGGT TATTATCCAG AGACCTGTGC AATGGTAAAA AACAAAATGG AAACCCTGGG 001120
001121 ACAGTTGGGG TCTTTCTAGA AAGAACTAGA GGCTGTATCC CAACCCCCTG GGTAAAAGGA GAGCCAGGAT CCTTATACAT 001200
001201 AAAGAGAAGT TGTTCTCTAA GGGAAGAGGC AAGTTCCTGG CTAAGTCTGG GGTATAATTG CCTCCTGACA AAGAGCAGAG 001280
001281 CTTCTGGCTA CAATTTGTTC TGGGGTCTGG AAAAAGCCGG TTTGAGTGAA ACCTGAATAG ATGGCAACTT TCCAAACTGC 001360
001361 ACACAATGGA AGAAAAACCC TCCACGTCCC AGATCACTTG CTCTGCTTCC CTGTAATTCC TGTGCCTTTA TTTCAGAAGC 001440
001441 TAGAAAGTCT GATACAGCGT CTGCTTCGAA TAGTTTAGAA GGCAACAAGG ACAGATCGAG TACCATGTTC TAGAACTGTC 001520
001521 GGGAAGTGAA CACACCCAGT AAGATGATGC CATATTTTGG TCCATGTTAA TCTACAAAAA TAACCACAGA AACAGCTGTA 001600
001601 ATCTACTGAA TGTTGCCAGC CAAAATAAAT CTTTGCAGGG TATTTTTCAA GTATTGTACT TCCTATACCT TTTCCAGATT 001680
001681 TCACCGTTAA GACCAAACCT TCCTCCCAAG ACTTGACTTT CTGCATTATT TTTGGAATGC AGTCTTTTTT TTTTTCCCCC 001760
001761 ATTTTTAAGA GGGTCTTCAA ATCCTCATCC TGTTTCGCAT TCTTACTGTT TCCAATTCCT AGCCTGGCTC CCTGCCCTAT 001840
001841 TATAGTGGGG CTCTCCTGGC TTCCAGCCCA ACAGTATGGT TGCCTTAAAG GATGGACTTT AGGCCAGGTG CGGTGgcact 001920
001921 ttgggaggcc gaggtgggta gatcacaagg tcgggagttc aaaaccagcc tggccaaaat ggtgaaaccc tgtctctatt 002000
002001 aaaaatacaa aaattagctg ggcacagtgg cgggcacctg taatcccagc tacttgggag gctgaggcag gagaatcgct 002080
002081 tgaatccggg aggcagaggt tgtagtgagc cgagatcaca ccactgcact gggcattaga gcaagactcc gtctcaaaaa 002160
002161 aaaaaaaaaa aTGGACTTTA AAAAGTGACA CAGAAAGCCG GCTCCAGTGG ATGGGTGGAT GGAGAGAAAG CTGCAGTCAA 002240
002241 GAGTGAATCA GATGGGCTTT AAAAGAGCAT CAGACTTAAT TTTT
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Predicted Small Protein

Name NONHSAT089909_smProtein_1736:1984
Length 83
Molecular weight 9485.1406
Aromaticity 0.19512195122
Instability index 59.0890243902
Isoelectric point 10.4027709961
Runs 13
Runs residual 0.0226348854398
Runs probability 0.047429782724
Amino acid sequence MQSFFFSPIFKRVFKSSSCFAFLLFPIPSLAPCPIIVGLSWLPAQQYGCLKGWTLGQVRW
HFGRPRWVDHKVGSSKPAWPKW
Secondary structure LLLEEELLLLLEEELLLLLEEEEELLLLLLLLLLEEEELLLLLHHHLLLLLLLLLLLLLL
LLLLLLEEELLLLLLLLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLL
LLLLLLLLLLLLLLLLLLLLLL
PiMo ooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiii
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