NONHSAT090111
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT090111 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
702 nt |
Genomic location |
chr3-:58193487..58196647 |
Exon number |
2 |
Exons |
58193487..58194033,58196493..58196647 |
Genome context |
|
Sequence |
000001 AGAGCAGCGC CAGGATGTCA CGGGAGCTGG CCCCACTGCT GCTTCTCCTC CTCTCCATCC ACAGCGCCCT GGCCATGAGG 000080
000081 ATCTGCTCCT TCAACGTCAG GTCCTTTGGG GAAAGCAAGC AGGAAGACAA GAATGCCATG GATGTCATTG TGAAGGTCAT 000160 000161 CAAACGCTGT GACATCATAC TCGTGATGGA AATCAAGGAC AGCAACAACA GGATCTGCCC CATACTGATG GAGAAGCTGA 000240 000241 ACAGGTAACA TGGGGAAGGG TGGGCCCTCT AGGGCTCAAG GTCAAGTGCA AGGGCATCTG AAAACCCCTG GGAACTGAAA 000320 000321 GTAATGTGAG ATCCCGCACT TGACCACCAG TTCACACAGC CAGTGTTGCC CAGGAGTCCA GCTCCCTTAG CCACGGTCCT 000400 000401 GAGAACTTTC AACCAGTTGA TTTTACTGTG ATAAAATAGA ATAGGGGAAA TAGATGAGGG GTCTGGACAC AGAAAGAAAT 000480 000481 GAAAAAAGCA GATGAGGCTG AGCTAAAAAG TACAGTTATG AAGAAAATGT TGGAGAAAAG AGAAAAGATT AGAAACCAAT 000560 000561 AGTAGAAGAA AGATAATAAA ATTACAACAT GCTCACACAC AGGAATATTA TGCAGCTGTT AAAAGTCATG CTGGTGgcca 000640 000641 ggtgtggtgg cacgtgccta tagtctcacc tacctgggag gctgaggtgg gaggatcgct tg |
Predicted Small Protein
Name | NONHSAT090111_smProtein_14:247 |
Length | 78 |
Molecular weight | 8829.5621 |
Aromaticity | 0.025974025974 |
Instability index | 48.7558441558 |
Isoelectric point | 8.98602294922 |
Runs | 11 |
Runs residual | 0.00677583286279 |
Runs probability | 0.0293957058663 |
Amino acid sequence | MSRELAPLLLLLLSIHSALAMRICSFNVRSFGESKQEDKNAMDVIVKVIKRCDIILVMEI KDSNNRICPILMEKLNR |
Secondary structure | LLHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLHHHLHHHHHHHHHHHHHLLEEEEEEE ELLLLLLHHHHHHHHLL |
PRMN | - |
PiMo | - |