NONHSAT090136
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT090136 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
693 nt |
Genomic location |
chr3-:58520304..58522874 |
Exon number |
2 |
Exons |
58520304..58520967,58522846..58522874 |
Genome context |
|
Sequence |
000001 AGTGCGGACA CAGGACAGAG GGGAGCCAGC CCTGGCTGAC ACCCAGCCCT AGGCAGTTCC TCTTGCACAC AGGTTCTTTG 000080
000081 CACTGACCAA TGCTGAGAGC AGACCCTCGG AGCAGCCGGG TTGGAAGTGT CTCTCCATAG TCACCAGACA GATCCAGGAT 000160 000161 AGGATGGGCA GCCCAGTGCA CCGAGTGTCA TTGGGGGATA CCTGGAGCAG GCAAATGCAC CCCGACATAG AGAGCGAGAG 000240 000241 GTATATGCAG TCCTTTGACG TGGAACGGCT CACCAACATC CTTGATGGAG GTGCCCAGAA CACTGCACTC CGCAGGAAAG 000320 000321 TTGGTAAGGG GAAGCTGGGG AATGGGACAT CTGTTTTATG CCCCATGCTT CTCTTGTAAG AAGAGTCCTT CATTAGCAGT 000400 000401 TCTGCTTCCA AATAACAAAC TTTGCCCTTG AAATTCCACT GTTAGAGATT CATTCCTTCG AACTGTAAAG ACAATCTTCA 000480 000481 CATGTCAATA TTGCCTGAGC CCACCTAGGG GATAGAAGAG TCctaggcag cagaagacct ggattctggt cctaaaattc 000560 000561 tgccactgca tagctttgta accttgggca attcactttc ccaccttggt cctcagtttt gtcatctgta aaataacaat 000640 000641 aatgtctgac ttcctttcca gatcCATGAA GCAAGTGGGT GAGAAGATTT CAA |
Predicted Small Protein
Name | NONHSAT090136_smProtein_284:430 |
Length | 49 |
Molecular weight | 5243.2266 |
Aromaticity | 0.0833333333333 |
Instability index | 50.0814583333 |
Isoelectric point | 9.64959716797 |
Runs | 9 |
Runs residual | 0.0219298245614 |
Runs probability | 0.040138177393 |
Amino acid sequence | MEVPRTLHSAGKLVRGSWGMGHLFYAPCFSCKKSPSLAVLLPNNKLCP |
Secondary structure | LLLLLLHHHHLLEEELLLLLLLEEELLLLLLLLLLLLEEELLLLLLLL |
PRMN | - |
PiMo | - |