NONHSAT090290
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT090290 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
557 nt |
Genomic location |
chr3+:65829565..65830121 |
Exon number |
1 |
Exons |
65829565..65830121 |
Genome context |
|
Sequence |
000001 ATGGTTCACC ATTCTCTTGA CCCAGAAACC CCCACAAAAA GCATGCAAAT TGACAGGTTA AAATTTTCAT TTTCACTGCA 000080
000081 AGAACACCTG TGGAACCACC CAGGCCATCG AGGGTATGCA GATATGAAAG CCACCAAGTA TCTAAAAGAT GTCACTTGAC 000160 000161 AGAAGCAATG TGTGCCATTC CAAAGCTACA ACAGTGGAGT TGGTAGGTGT GTCTGGGCCA AACAGTGGGG CTGGACACTG 000240 000241 GGTCGGTGGC CCAAAAAGAG TGCTAAATTT TTGCTGCACA TGTGTAAAAA TGCAGAGAGT CATGCTGAAC TTAAGAGTTT 000320 000321 GGATATAGAT TCTCTGGTCA TTGAGCAGAT CCGGGTGAAC AAAGCACCTA AGATGTGCTA CAGGACTTGC AGAGCTCACA 000400 000401 CGGTCAGATT AACTGATACA CGAGCTCTCC CTGCCACATC TAGATGATCT TGACTGAAAA GGTACAAATT GTTCCTAAAG 000480 000481 CAGAACAGAA AGTTACTCAG AAGAAAAGGA TATCCCAGAA GAAACTGAAG AAACAAAAAC GTATGGCACA AGAATAA |
Predicted Small Protein
Name | NONHSAT090290_smProtein_443:556 |
Length | 38 |
Molecular weight | 4422.356 |
Aromaticity | 0.0 |
Instability index | 52.5027027027 |
Isoelectric point | 10.5824584961 |
Runs | 5 |
Runs residual | 0.0446317877511 |
Runs probability | 0.0109874580463 |
Amino acid sequence | MILTEKVQIVPKAEQKVTQKKRISQKKLKKQKRMAQE |
Secondary structure | LLLLLLEEELLHHHHHHHHHHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |