NONHSAT090316

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT090316

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2083 nt

Genomic location

chr3+:67346724..67356783

Exon number

2

Exons

67346724..67346827,67354804..67356783

Genome context

Sequence
000001 AGGATTCCTC ATGGGATGAC AAGGCCTTGC TCCAGGGATG ATGTTTCCCA CTGTAGGAGA ACAGCTACTG TCTTTGATGA 000080
000081 ACTGAGTCTA CAGGGCTATT GAAGGGTCTT GCTGTGCTGC CCAGCCTGGA GTGTGGTGGT GCGATCATGG CTCACTGAAG 000160
000161 CCTCCACTTA CAACTCCTGG ACTCAAGTGA TCCTCCCACC TGAGCCTCCT GAGTAGCTAG GACTATAGGC ACTTGGCACC 000240
000241 ACACCTGGCA AATTTTTTTT ATCATAGGAT CTCGCTACAT TGACCAGGCT GGTCTCAAAC TTCTGGCCCC AAGTGATTTT 000320
000321 CCCACCTCTG CCTCCCAAAG TGCTGAGACT ACAGTCTGGC CCTTCATGAT CTCTAGATAT TACCAAAAGT CCCAGAGAAA 000400
000401 TGAGTGCATG GATGGCTTAA TGACAACCCA CTTTCTTCTC TGGAAGAAAG AACTTAGTAC AGCCCTACCA GAAGGTGGGA 000480
000481 TGGCAATGCC ATCTTCAGAC TTGAGTGTTG GGGAGGCCTT TTCTGCTAAC CAACAGCAAA TGTTTTACAA GAGAAACAGG 000560
000561 ACACACAGTA GATGAAGGCA GCCATGGAAA ATCTGTATGA ATTATCCACT CTGTTGATCT GTGCTTAAAA TATAGAAGGG 000640
000641 AAAGTGAAGA ATAAAATGTG TCCATGAGCA TCCCACCTGG CTTGCATCCA GATTGAACAA TTTGAATGCT AAGAGCAGGA 000720
000721 TTTTGATAGT ATGGCAGACA TTGCTCATTG CTCAGCCAAC CCATTCTCCC CTTTGTCCTT ACTAACAACA TCCTGATTTT 000800
000801 GTGTAGGCAA CAATGCTCCC AGCTAAAATT ACCTACTTTA CCAGACTCCT ATGCAGTTAG AGGTGGCCCA GTAACCCTGG 000880
000881 CAAATAAGAT GCATGCAGGC ATTACTGGAC TGAGCTTCCA AAAACAGCTT TTAAAAGGGG CAGGCTCAAC TGCATGACCC 000960
000961 TTTGGGCTTT TGAACCTCTT TACCTGGAAA TGAGACCTAA AGCTAAAAAT GAAACAACTG TCTTGTTATC ATGAGGTGAC 001040
001041 TATCATGAAG ATGAAAACCT CCACACCAAA TAAGTGGAAA GAAAAGTTGG AAAGAGGTGG AGAGAATGAC TCAATCTTTG 001120
001121 ATGTATCAGT GCTGCATTGC CTCCCTCAAA ATGTCTCAAC TGTTTTATGC AGCTGAGCAA ATTCGTGATC TCAAACAGCA 001200
001201 ACTCAAGCAA CTCCAGGAAA GAAAAAAAAT TGACCACTGG AGGAGATACC TAAGATAATC CTGGTGATAC ATTCGGTGCT 001280
001281 ACAAGAAAAA AATAATCCTC GCACCCAAGA AGAAACAATG AAACCTTATT TTTCATGTAA ATTTCTACTC CTGTTTGGTT 001360
001361 CAAGCATTTG AACTGTTGCA TAAGATTTTT TTGAGTGCCG CTGAGAAAAG TATTATCAAT CTAGAATGCA CCAGAAAGAA 001440
001441 AGCAGCAGAA AGATTACAAA CAGCTTTTCT AAACCCTTGT CCAGCATTTA CCAGAAAGAG CAGCATGAAT TAACAAAAGC 001520
001521 AGAAATTTTA GTTAAAAAAA AAAAGCAACT CAACTCTGAT TCCTGAGACA TATAATACAG GACGTCTATC GCCCATTTAC 001600
001601 CCTCATCCAA CTCAAATGGC TACCAAACTC TAAAATTAGC AGGGCATGTC GGGAAGACTT CTTATTCCTT GTATTACAGA 001680
001681 TCTGTTGACG TGTCAGCAGC ATTTTCCTTT GCAAGTTATA AAATTTCCTT TCCCCAGTCT TCAAATAGGC ACTTCCCCCT 001760
001761 CCCCAAAGTC TCTTTTGTCA CCAACTGCCA TAACCCACCA ATCAGGGAAA CAAATTTCAG TTCATAAAAG AAAACCATGG 001840
001841 GTGACCTACT GAGGACCACA GTTTCATTTC CATAACAAAG ACTGACATAC AACCCATGCC CAAAGTCTGG AACAGCTATG 001920
001921 AATAACTGTG GCTGAATAGT CTATTTTCTG TTGGGATTCA TATCAAACTC TATATTTGAA CTTGAGATAT CAGAACTTTT 002000
002001 GTATTATAAT ACATAAAACC TAGGTAGTGA GTTTGAATTG TCTGCATTTA TTCTCCATGG GTAATAAAAA CTCATTGTTT 002080
002081 CTC
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Predicted Small Protein

Name NONHSAT090316_smProtein_365:574
Length 70
Molecular weight 8022.0814
Aromaticity 0.101449275362
Instability index 67.5595652174
Isoelectric point 9.35760498047
Runs 9
Runs residual 0.0088965418281
Runs probability 0.0463993405171
Amino acid sequence MISRYYQKSQRNECMDGLMTTHFLLWKKELSTALPEGGMAMPSSDLSVGEAFSANQQQMF
YKRNRTHSR
Secondary structure LLLHHHLHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLEELLLLLLLHHHHHHHHHHHHH
HHHHLLLLL
PRMN -
PiMo -