NONHSAT090358

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT090358

Source

NONCODE4.0

Same with

,

Classification

sense

Length

571 nt

Genomic location

chr3-:69355558..69370133

Exon number

4

Exons

69355558..69355873,69360414..69360508,69362603..69362668,69370040..69370133

Genome context

Sequence
000001 AGATGGACAA AGTCTTTCCA CCAGTAATCA GCACTTGCAC TCTGAGGACT GACTCTTACC AGCTGGGGAG CAAACAGGCC 000080
000081 AGCTGGAGAC CGAGATGACA GAAGGCAGGC ACTGCCAGGT GCACCTCCTG GATGATAGGA GACTGGAGCT GCTGGTTCAG 000160
000161 CCCAAACTTC TAGCAAGAGA GTTGCTGGAC CTAGTGGCTT CACATTTCAA CCTGAAAGAA AAGGAGTATT TTGGAATAAC 000240
000241 ATTCATAGAT GACACGCCAA GAGGAGAAAC GGAAAAATAG ATGGCAATTA CGCAATAAAA GCAGTGATGA TGACCAACAA 000320
000321 CCACAGATTC AAGGTCACGT TACTGGGAGA GGGATAGCAT TTCTGAGATT ACGCTTGTTA GGGCCTTGCG CAGCTCTGTG 000400
000401 TGCAAAGTTA GTCTTTCACC CCTAGAGGGC AGTCACGGCC CTCCTGAGGC ACCAGTCCTT CAGGTCACCG TAGTGGTTCC 000480
000481 ATCTCTTCAC CCATTTCACT TTTTGTTTTG CCTTCTCATG TTTTGAAAGG CTTTGCTAAA TAAGCTTTGT TTACCAAGAA 000560
000561 ATAACAGATA G
[back to top]

Predicted Small Protein

Name NONHSAT090358_smProtein_248:424
Length 59
Molecular weight 6713.6981
Aromaticity 0.051724137931
Instability index 57.4293103448
Isoelectric point 10.4183959961
Runs 9
Runs residual 0.0014209928003
Runs probability 0.0291762350586
Amino acid sequence MTRQEEKRKNRWQLRNKSSDDDQQPQIQGHVTGRGIAFLRLRLLGPCAALCAKLVFHP
Secondary structure LLHHHHHHHHHHHHHLLLLLLLLLLLLEEEELLHHHHHHHHHHLLHHHHHHHHHHLLL
PRMN -
PiMo -