NONHSAT090389
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT090389 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
576 nt |
Genomic location |
chr3+:70803005..70803724 |
Exon number |
2 |
Exons |
70803005..70803443,70803588..70803724 |
Genome context |
|
Sequence |
000001 ATGGGCAAAG GAGATCCTAT GACACCAAGA GGTGAATGTC ATTATACGTG TTCTTTGTGT AAACTTGTCA AAAGGAGCTC 000080
000081 AAGAAGCAGC ACCCAGGTGC TTCAGCCAAC TCCTCCTTAC AGTTTTCTAA GATACACTCA GAGAGGTGGA AGACCATGTC 000160 000161 TGCTAAGGTG AAAGGAAAAT TTGAAGACAC AGCAAAGGCA GACGAGGCCC ATTATTTAAT TAAAAAGAAA ACAACTATAT 000240 000241 TTCTTCTAAA GGAGAAACAA AAAAGTTCAA GGATTCCAAT GCACCCCAGA AGCCTCCTTT GGCCTTTTTC TCCTTCTGTT 000320 000321 CTGAGTATTG CCCCAAAAGC AAAGGAGAAC ATCCCAGCCT ATCCATTGGT GATGCTGCAA GGAAACTGAT AGAGATGTAG 000400 000401 AGTAACACTG CTGCAGATGG CAAGCAACCT CATGAAAAGA AGGCTGCCAA GCTGAAGGAA AAATAAGAAA AGGATATTGC 000480 000481 TACATACCAA GCTAAAGGAA AGCCTGATGC AACAAAAAAT TGACTCATCA AGGCAGagaa aagcaagaaa aagaagagga 000560 000561 agatgaagat gatgaa |
Predicted Small Protein
Name | NONHSAT090389_smProtein_155:388 |
Length | 78 |
Molecular weight | 8694.2419 |
Aromaticity | 0.0779220779221 |
Instability index | 61.1051948052 |
Isoelectric point | 9.99774169922 |
Runs | 8 |
Runs residual | 0.0321852060982 |
Runs probability | 0.0378687511041 |
Amino acid sequence | MSAKVKGKFEDTAKADEAHYLIKKKTTIFLLKEKQKSSRIPMHPRSLLWPFSPSVLSIAP KAKENIPAYPLVMLQGN |
Secondary structure | LLLLLLLLHHHHHHHHHHHHHHHHLEEEEHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLH HHHHLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |