NONHSAT090412

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT090412

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2052 nt

Genomic location

chr3-:71666786..71711939

Exon number

5

Exons

71666786..71666987,71677814..71678203,71680963..71681402,71703623..71704067,71711365..71711939

Genome context

Sequence
000001 AGTCTCCAGG CTTTGAAGTA TTCACAGGAA ACTCAGCAAA GAGAAATCCA GTTACTTTGA GTTACTTTGG GTCGGTGGAT 000080
000081 ATATTGTTTG TTTGGTTTGG TTTTACAGCA GCTGGTGGTG AAGCCCAAGC CCCATGTGCT GGCACCACCG GAAATTAAAA 000160
000161 TGCCTTCTTT CTTCTTCTAC CTGAGACAAG AGATTTTTAA CATTGCATTT TGTAATTCAA GGGAACGAAA CATAGAAGCA 000240
000241 CACATGTTGA GTTTTCCCCA TGTTCTAATG AAAATTCAGA GCTTTGCATG CTTTTCGCAT ATAAGTGTAT CTTTCTGAAT 000320
000321 TTATAGCACT TTCAATATAT GAGGCATTTA AGAGTTTACA AAATGTGTTT GTGTGCATTA GCTCATGTAA TCTTTCTAAC 000400
000401 AAATCAAGGC AGTGAGCTGG TTACCTCTGG TTTGCAGATG AGTTGGCCGA GAGAAAGGTG CAGAGACTTG CCCAGCATCA 000480
000481 CTTAGCTGGT CGGTGAGTGG CAGACCACAG CCCTGTGTGA TTCCAGAGGG AATACTTCCA GCTAAGAGAC GCTTCTTTCA 000560
000561 ATTTATTGGT GGAAACTTTT TATAATTCCT GCCTGTGAGA GAAACAGAAG AACACAGCTT GTTTGGGGGA TCCCAGATGG 000640
000641 AGTTTGCAGG ATGGATATTA GAAAAAAATC ATCTCTTTTG AGTGGTAGAC TGAGAAATTT AAATTGGAAC AGCGATGAAA 000720
000721 AACCATACAC GTCGGGAGAT GGAGTGGGGG TGAGGCAACC CATGAAGTCA GTTTTGCATC TGTAAAAAGT CATTTTGGAG 000800
000801 AGTCGATCTG CACTTTAAGA ATTCCTAATG GGTACAGTCA GTTCAGACCC AGCTGAATGT GTTGGAGTCT CTGATAGTGT 000880
000881 TCTTCTAATT AAAGGGGGGT GGGGAGGGAA ACAATAACAG ACACACAAAA ACACACACTC AACCAAAGAT GGGGGAAATG 000960
000961 TGAGCACCAG ACATGCTCGT GCTGATTTGG GGATGACAGT TGAAGAGACA AGAACATTTT ATTTCTAACT TCGTCATTTT 001040
001041 GTCCCACTTA AGCAGACCCT GGTAGAAGGA TGCCTGCATT TGGGAAGTGA CACCAGGAAA CAGTGGTAGA GTAGTGGAAA 001120
001121 AGTGAGTAAG GCTAGGGAAG TCAATGAATT ATCAAGCTTG CTACCTTGTG GATAACTGGG AAGACCACTT AGGAACCCTG 001200
001201 GGCAGCAGAA TAGAATGTGT GCTTCAGAAT GACTCCCCCC GACCCTCGTG ATGCCCCTGT CCCCTGGGGG CTGGGGGAGC 001280
001281 TGCAGTACAT ATCTACCAAA TCTTTCTTTC TTTCTTTTTT TTTTCTTTTT GAGATGGAGT CTCACTCTGT TGCCCAGGCT 001360
001361 GGAGTGCAAT GGCACAATCA CGGCTCACTG CAGCATCAAC CTCCCAGGCT CAAGTGATCC TCCCACCTAA GCCTCCTGAG 001440
001441 TAGCTGGGAC TACAGGCATG GTGGGCTCTT CAAAGTAGAG GATGCTCTAT ACACAAAGGA GTTTGTTCTT TGAATTATCT 001520
001521 TTTATTTATT GACAGCTGGG GTGATGCAGG GCTGTTTCCT GTGTTAAGAG AGTGTCAGTT ACTTAGCTAA TCATATTTAT 001600
001601 CACCCAGGAT TCTTTATTTG TTGATAGCAC TGGAGTATAT TGGAGTTTTT GTGTGCTACG TGTATATTTC CCTAGCTGCA 001680
001681 GTGAATGTGG TTTTTATATT TATGTGAAAC TGCTAATGTG TTGCTCGCTA GATCATGAGC AATGGGCTTC TGACAGCTCT 001760
001761 GTTCATTAGT CAGCTTGGGG GAAAAAATAA AAGAAAACAC ATTGATATAG AAACAGAGTG TGAGCCAGCA ATTATCATCA 001840
001841 GAGAGCACAA AATTACTTGA AGTCAGAAGT TTGAGACCAG CCTGGGCAAC ATGGTGAAAC CCCATCTCTA TTAAAAATAC 001920
001921 AAAAATTAGC TGGGTATGGT GGCAGGAGCC TGTAATCCCA GCTACTCGGG AGGCTGAGGC AGGAGACTTG ATTGAACCAG 002000
002001 GGAGGCGGAG GTTGCAGTGA GCTGAGATCG CACCACTGCA CTCCAGCCTG GG
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Predicted Small Protein

Name NONHSAT090412_smProtein_1250:1429
Length 60
Molecular weight 6509.4656
Aromaticity 0.152542372881
Instability index 62.7152542373
Isoelectric point 6.49481201172
Runs 7
Runs residual 0.0258124708443
Runs probability 0.0268756151109
Amino acid sequence MPLSPGGWGSCSTYLPNLSFFLFFFFLRWSLTLLPRLECNGTITAHCSINLPGSSDPPT
Secondary structure LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHLLLLEELLLEEEEEEEELLLLLLLLLL
PRMN LLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLL
PiMo oooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiii