NONHSAT090523

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT090523

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2368 nt

Genomic location

chr3-:75470089..75484099

Exon number

4

Exons

75470089..75472212,75475601..75475750,75481959..75482021,75484069..75484099

Genome context

Sequence
000001 TCCGTGCTGA AACCCCCGGC GCTCCTGCCA CAGCTTAGAA GCAAAGTTAA GAGACTCATC AGATTCTGAG CTGCTGCGGG 000080
000081 ATATTTTGCA GAAGACGTGC TGTATTGCCC AGAAGCCATC GTGTCGCTGG TCGGGATCCT GCGGAGGCTG GCTGCCTGCT 000160
000161 GGGAGCACCA GCAGTCTCCT GAGGTCTACG TGGCCTTTAC CGTCCACAAC CCAGAGACGT GCCAGCTGTT CACCACCGAG 000240
000241 CTAGGCCGGG CTGGGATCAT ATGGGAAGCG GAAGCTCATC ATGACCAGAA ACTGTTTCCC TATGGAGAGC ACTTGGAGAT 000320
000321 GGCAATGCTG AACCTCACAC TGTAGGACTC ACACACGACT CCAACGGGAT TGTGAGAATC AAGTCAATCT CATGGGAAGA 000400
000401 ATTTTTATAT GGGAAAGCGG ATAAAACTTT CATTGTACTG GAATGTTTGG AGAATGTTAA ATTCCAAATC AGAAACCACA 000480
000481 AACTGCCCTC TAATAAGACA TCGGCTATCT AAGCGTGTGG GTGCCCCCTT TCTGCCAGCA GTTCTGGTTC TTACGAAAAT 000560
000561 CACCATATAT CAGACATGAA AATTCTGGCT TTGTGCAGAT AAAAAAGTGT GTATCAAGTA TGACGTTCCC CCAATGTGGA 000640
000641 CACACTTGGT TCCTCAGAAA GCCAAGCCCA CTGCAGCTGC CACATCCCTG GACACACTCG GTTCCTCACA AAGCCAAGCC 000720
000721 CGCTGCAGCT GTCACATCCC TGGACACACT CGGTTCCTCA CAAAGCCAAG CCCACTGCAG CTGCCACATC CCTGAGCCTA 000800
000801 TGGTGCAGCA GGTGCTTTTT TCAAGACAGG GATCAAAGTG TTAGGAACAC GGCAGAAAGG TGACACCTGG AGACCAAATG 000880
000881 CAGGATGAGG AGTACTGCAG AGGTCACAGG GAAGTCAGAG AACAGTAATA CGCTAACAGG GGCACGGGGC ATGAAGAACA 000960
000961 AAAGACAGGA AGCGTTTCAG AGACTCCAAA GAAGAAATCA GGGCCAACCA CAGCTTCCCG GGTCATTCAC CAGGTGGCAC 001040
001041 CACTGCCGTC ATTTCAGCTT CTGGCCACTG GGAGGCGCTG CTCGAAAGGG TTTGCCCTGA CACTCCAAGA AGCTGCGGGA 001120
001121 AGGACAGCAG GGGCCCTGGG GTTTTAGCCT CTGGCCCAGG AGTTATGTGT CCATAACCAA AGGGAGCACA GTCTGCACCC 001200
001201 AGCTCTCATC CCATCAGAGC TGCTGCGACT CCTGCAGGTT CTTCCGGAAC TGGTTTAGCT TGCCTGCAGG ATCAGGAAAG 001280
001281 TTTGAGAAAA GCATCTGCAA AATACTAAAG AGCAGAGCTT ACCTCATTGC CTGTCCCCAC CCCATCCCAG GTCACCACCT 001360
001361 GGCTGACCCC AGGTCCCCGA CCCAACAACA ACCCCTCCCA AGTCCCTAAC TCCCTCACTT GGACTTGAGA CCCTTCACAC 001440
001441 CCCAGCAGCG CTCCGCCTCC CACTTGACAT CATGCTTTCT GGAAACTTCC CCGTATGTCC CACTTTCCCA CACTTGGTGC 001520
001521 CCTGGAGCAC CTTCCGGCCT CTACATGCTG TACGTTCCCC TGTGAGCACC CTCCTCTCGG CCTCTGGCCA ACACAGTCCC 001600
001601 ACCCATCTGT GGGTAACAAG GGGGAGTGGG TGTTCTTTTC AGCCTTGCTA AACTCTCTGA ATcaaggatc acaaactaca 001680
001681 gcctgcaggc caaatccagc ccacagcctg tgtttgtaaa taaagcttta ttggaagaaa gccacacccc ttaatctaca 001760
001761 gatgatctgt ggctactttc acaccacaac agagtaccat ggttctgaca gagactgggg gacccagtct aaatgacttc 001840
001841 tgacctggac ctttactgaa aaTCCTCCCA ATCATTCTGT TGACAAGAAT GATGTATTAC TTTTTGCAAT AAGAAACAAG 001920
001921 TAACCTTTGC AGAATTCCAC CCATCTTTCA AGGCTGGTCC CAGAAGTTCC CTTAGCCCAT GCACCTACCT GATCCTGATC 002000
002001 ACTTCCTAAA CTGCAGCCTG GCCCACCTGG ATCCAGCATC ATTTGTGGCG TGTCAGCTCC ATAAATCCAG AGGGCAGGTG 002080
002081 GCGTTGTGTC CTAACTTTCC CGAGCCTACT GTACTGAAAC AGGACAGCAG AGTAGGCCAG CCTCTGTGAC TTCTGCTCCC 002160
002161 TCCCTAGCTT TTCCACCAGA CCCCCCATGG TCCCACCCTG GCTGTGGGAA GCAGGGATCA GGGAGTGTGG CTCGGTGCCA 002240
002241 GTCTCCAGAA CCCTGCCCAC CCTGGCGTGG TGGCAGACAT GGCTACCTGC AGCTGAGCTG CCAGTTCCTC TGAGTCCTCA 002320
002321 AAGACCAGGC CATTTTCTTC ATGTTTCACC AGCTCATGTA AACTGCAG
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Predicted Small Protein

Name NONHSAT090523_smProtein_884:1099
Length 72
Molecular weight 8093.0569
Aromaticity 0.0845070422535
Instability index 58.8676056338
Isoelectric point 11.9127807617
Runs 11
Runs residual 0.00637509266123
Runs probability 0.0481765187648
Amino acid sequence MRSTAEVTGKSENSNTLTGARGMKNKRQEAFQRLQRRNQGQPQLPGSFTRWHHCRHFSFW
PLGGAARKGLP
Secondary structure LLLEEEEELLLLLLLLLLLLLLLLHHHHHHHHHHHHHHLLLLLLLLLEELLLLLEEEEEE
LLLLHHHLLLL
PRMN -
PiMo -