NONHSAT090630

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT090630

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1395 nt

Genomic location

chr3+:83267285..83322491

Exon number

4

Exons

83267285..83267522,83280670..83280725,83281363..83282224,83322253..83322491

Genome context

Sequence
000001 gagcgagggc tgtgaggact gccagcacgc tgacacctct caccgccatt tgccaggtcc agagttcttg tcctacatcc 000080
000081 aggaagaatg aagtacgtgg acaactggaa agtgagtaag gcagagagaa gcttcactga gtaacagaac agctatcagg 000160
000161 agacctgcag tgggtagccc ctttccatag gcaggtcggc ccaacaagtc aggaagacct gaagtgggta gcttcttcGA 000240
000241 CTGATTCCTT ATCCAACATC ACTTTCTGGA CTACCTAGAA TCCAACTATC ATGTGCTTTC ACCAAGATGT CATCTTGTGG 000320
000321 GCTAGTCCGT TGGACCTACT TGACCAATCA GACACTATCC TAATCTCCAT AATGTGATAC CTCCTGAGAG GCAGCCATTT 000400
000401 GACACAGACA CTTTTCTCAG TTTGCTCAGG CTCCAACGCC ATGATCTGCT ATGCAACTCT CTCCACAGTC TCCATCATGG 000480
000481 ATACCTGCCT TTTATTCCAA CACCTAATGT TTTAGTATTA AATCATTCCA TATGATAAGA GTAGAGAGGT GAAAGAGGAA 000560
000561 GACTCATTCA ACGGAAGttg atctgctgtg ttttcacaat tattccatac ataacatttt ctaatatctt tgttacttct 000640
000641 ttttttgact cagttacata gaaatatttt tcttaatttc caaatatatg agtatattcc ttataatttt gctattgatc 000720
000721 tttaatctca ttccattgat tttaaagatt gttctcttta agactgcaat acattgaatt tgttaggcct ttctattgcc 000800
000801 tatcatatgg tcacatttgg tgaattttca atgtgctctt gagggaaaaa aaaagtgtat tctagagttg attcgtttaa 000880
000881 tgcagtataa ataatattat gttatgttat tttaattttt ctgaatactt agtgattttt aaaaaaccat ccataccgat 000960
000961 ttccaagaag gagtattaaa acctccacta gtaattgtgg atgtgcctat atctgttttt agttgtctcc aattttgaat 001040
001041 tttttatctt tagtatggaa aaataagcat ttttatttct tgtaaaaatt aattatttat tataaaatat ccgtttttat 001120
001121 taatggcaaa tatctttgtc ttgatgccta ctttatTATG TAGCTCTGAT GAAATTGCCA ATAAAAGGAC CAAGCTTCAC 001200
001201 TGATCACAAG AAGTAATATG GAATCCATAC TATCATATTC CCATTTTCTG AAAACTTAAC CATGAGTTGG GGCTTCAAGG 001280
001281 ACAGGAGGCT TCTGACATTG GGTTATCTGA TGGCACAACA CCAAAGAGAC ATTCTACACT GGTTTGAACT GAGAGCAATG 001360
001361 GACCTGAGAC CATTCTTGAA ACCAGGTATA CTGGG
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Predicted Small Protein

Name NONHSAT090630_smProtein_290:376
Length 29
Molecular weight 3218.7595
Aromaticity 0.0714285714286
Instability index 59.3857142857
Isoelectric point 3.76715087891
Runs 5
Runs residual 0.0246478873239
Runs probability 0.0424306659601
Amino acid sequence MCFHQDVILWASPLDLLDQSDTILISIM
Secondary structure LLLLLLEEEELLLLHHHLLLLLLLLLLL
PRMN -
PiMo -