NONHSAT090792

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT090792

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

923 nt

Genomic location

chr3+:97940888..97941810

Exon number

1

Exons

97940888..97941810

Genome context

Sequence
000001 ATGGAAGAGG AAAATGCAAC ATTACTGACA GAATTTGTTC TCACAGGATT TTTATGTCAA CAAGGATTTT TATGGGAAAT 000080
000081 ACCCCTGTTC CTGGCATTCT TGGTAATAGA TCTCATCACC ATCATGGGGA ATCTTGGTCT GATTTTTCTC ATCTGGAAAG 000160
000161 ACCCTCACCT TCATATTTCA ATGTACTTAT TCCTTGGGAG TTTAGCTTTT GTGGATACTT GGTTATCATC CACAGTGACT 000240
000241 CCGAAGATGC TGATCAACTT CTTAGCTAAG AGTAAGATGA TATCTCTCTC TGAATGCATG GTACAATTTT TTTTCCCTTG 000320
000321 CAATCAGTGT AACCACAGAA TGTTTTATCT CGGCATCAAT GGCATATGAT CGCTATGCAG ACATATGCAA ACCTTTACTT 000400
000401 TATCCAGTCA TTATGACCAA TGAACTATGC ATCTGGCTAT TTGTCTTGTC ATTTCTAGGT GGCCTTTTTC ATGCTTTAAT 000480
000481 CCATGAAGGT TTTTTATTCA GACTAACCTT CTGTAACTCC AACATGATAC AACATTTTTA CTGTGACATT ATCCCATTGT 000560
000561 TAAAGATTTC ATGTACTGAT TCTTGTATTA ATTTTCTAAT GTTTTTTATT TTCTCAGGTT CAATTCAAGT TTTAACCATT 000640
000641 GGGATTGTTT TTGTATCTTA TATGTTTGTT CTCTTTACAA TCTTAAAAAA GAAGTCTAAC AAAGGCATAA GGGAAGCCTT 000720
000721 TTCCACCTGT GGAGCCCATT ACATACCTCT CTCTTTATGT TATGGCCTCC TTCTCTTCAT GTATGTGGGC CCTGCAGCTC 000800
000801 CACAAGCAGA TAATCAAGAT ATGATGGAGT ATCTATTTTA CCCTATCATT GTGCGTTTGT TAAACCATAT TACTACAGCC 000880
000881 TGAGAAATAA GCAATAATAG GTTCACTCAC AAAAATGTTA AAA
[back to top]

Predicted Small Protein

Name NONHSAT090792_smProtein_53:268
Length 72
Molecular weight 8100.916
Aromaticity 0.12676056338
Instability index 45.7197183099
Isoelectric point 5.48687744141
Runs 9
Runs residual 0.0217939214233
Runs probability 0.0384011462443
Amino acid sequence MSTRIFMGNTPVPGILGNRSHHHHGESWSDFSHLERPSPSYFNVLIPWEFSFCGYLVIIH
SDSEDADQLLS
Secondary structure LLEEEEELLLLLLLEELLLLLLLLLLLLLLLLLLLLLLLLEEEEEEEEEEEEEEEEEEEE
LLLHHHHHHLL
PRMN -
PiMo -