NONHSAT090836
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT090836 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
999 nt |
Genomic location |
chr3+:98700013..98717323 |
Exon number |
3 |
Exons |
98700013..98700230,98701308..98701378,98716614..98717323 |
Genome context |
|
Sequence |
000001 AATGAAGCCA CAGAGATTTG CTGATACATT TGCTAGGCAC GACTTCTGGT CATTTAGAAA GCTATTTTGT GGCTTCATCA 000080
000081 ATAAGGTATT CCCCAGCTGT GTTACTCCTT CGCATTGTTA TCTCTTTCCC TGGAATTGAA GGCTTCCTGG TCTGAGGCAA 000160 000161 GGACAATTAT TCCCTCACTG TCAACCCTGA TCTCTGGCTG CAGTAATGAG TAGAGGAAAT GAAGAAATAA GAATGGAAGC 000240 000241 ATAATCATTT GTCCGAGGTC ACAGAGGGAG ATGATTACAC AGCTGGAATA AACTCTCCTC CTTCAATACC TGACTACTTG 000320 000321 CACCATCCAG CAGATATCCT CTACTACCAA GTCTCAACAG ATGGTTCAGC TGGTCTTTAA TGAACAAAAG GCATTTGTGT 000400 000401 AATGGACTCT TATTGCTCAA GAAGAATTTC TTCCTTCCTG AAACATGAGG AGAAACTGAC AAAAACTGTC TCCTTGACCA 000480 000481 AACCCTAGTC AGTTGCCTAT AAGCCCTGTA GGCTGTGACC TTAGTGTCTA TCCTTATCAG ACACGCATTA CACAACCATA 000560 000561 GCAACAGTCT TGCTAAGTTG GTTTAACCAG AACCCCTACC CTTGATATCT GATTTAATTT ATAATTCCCC TGAGTCCCCG 000640 000641 AGGTGACATC CATTCATCCT GGCCAGCTTT CAATAAGAAT CCTATTGGAT TATTTAGCTA GAAATCACCC CTTACACTTA 000720 000721 ATGCTTCCTT TTAGTAATTT TGCATCCACT AACCCCGACC TTGCTCGTTG GCTATAAATC CACAAGTTGT CCGTGTTGTG 000800 000801 TTTGGAATTG ATTACAATTC TATATTGAGG TCTCTTTTCC CATATTGCAA TAGTTCCTGA TTAAAATCTG CTTTTGCCCA 000880 000881 TTGATATGGT TTGGTTGTGT ACCCACTCAA ATCTCATCTT GAATTGTAGC TCCCATGATT CCCATAATTG AATCATGGCA 000960 000961 GCAGTTTACC CCATACTGTT CTTGTGGTAG TGAATAAGT |
Predicted Small Protein
Name | NONHSAT090836_smProtein_401:487 |
Length | 29 |
Molecular weight | 3285.7913 |
Aromaticity | 0.0714285714286 |
Instability index | 53.6214285714 |
Isoelectric point | 9.51409912109 |
Runs | 5 |
Runs residual | 0.0246478873239 |
Runs probability | 0.0409291644586 |
Amino acid sequence | MDSYCSRRISSFLKHEEKLTKTVSLTKP |
Secondary structure | LLLLLLLLHHHHHHHHHHHLLLEELLLL |
PRMN | - |
PiMo | - |