NONHSAT090888
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT090888 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
834 nt |
Genomic location |
chr3-:101055973..101059269 |
Exon number |
2 |
Exons |
101055973..101056475,101058939..101059269 |
Genome context |
|
Sequence |
000001 TGGAAAAGAA AAGATAATAC TCAATCGGAG TACCATTAGT AGCTTGTGAG GATAAAGGAA GGAAAATATC ATTATTTATG 000080
000081 CCTGGTCAAA TGTTTTTTAC CCTACAGATT TGAGTTACAG AATACCACTG CCCAGTTATT GTTTCATATA AGAAATCTCT 000160 000161 TAGATAATAG GATTTTCAAT ATCAGTATAT GTTAACTTTA TTTTTACTTT TAAGGTTGAT TGTATATCCT CCACCACCTA 000240 000241 CTAAGGGGGG ATTAGGAGTA ACTAATGAAG ATCTGGAGTG TTTAGAAGAA GGAGAGTTTC TTAATGATGT AATCATTGAT 000320 000321 TTTTACCTTA AGTATCTTAT ATTGGAGAAG GCATCAGATG AACTTGTTGA ACGAAGTCAC ATTTTTAGTA GCTTTTTCTA 000400 000401 TAAATGCTTG ACAAGAAAGG AAAATAATTT AACAGAAGAT AATCCAAATC TTTCGTAAGT TAATCCTCTA ATGTACTTAA 000480 000481 GTTTTAAGAG AAAATGTACT ATTTTTGATG CTCCTAGTAA AGTGGCTTCT TTATAGTATT TCCTCAAGTA GGCAGTACTA 000560 000561 CCATTtgttc aggtcctggg tctgtttgcc atgagagcca tttctcatcc ttccactgtt ttgctgccca tgacagggag 000640 000641 gctgacactt gcagtctgca tttccaattg catgtccctg ggggaaatcc tggaagttgg agggcaagga agaaagaagc 000720 000721 taggttattt cttccctact ctctttgcat tgggaaatga ttctgacagt ggctgtattt cctctgtgag tccacctctc 000800 000801 acaggacaga cctgctataa ctccagcttt catc |
Predicted Small Protein
Name | NONHSAT090888_smProtein_188:457 |
Length | 90 |
Molecular weight | 10300.7395 |
Aromaticity | 0.112359550562 |
Instability index | 53.8957303371 |
Isoelectric point | 4.51068115234 |
Runs | 12 |
Runs residual | 0.00837188808107 |
Runs probability | 0.0324294883118 |
Amino acid sequence | MLTLFLLLRLIVYPPPPTKGGLGVTNEDLECLEEGEFLNDVIIDFYLKYLILEKASDELV ERSHIFSSFFYKCLTRKENNLTEDNPNLS |
Secondary structure | LHHHHHHHHHEEELLLLLLLLLLLLLLLHHHHHHLLHHHHHHHHHHHHHHHHHHHLHHHH HHHHHHHHHHHHHHLHHHLLLLLLLLLLL |
PRMN | - |
PiMo | - |