NONHSAT090904
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT090904 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
668 nt |
Genomic location |
chr3-:101399935..101405556 |
Exon number |
5 |
Exons |
101399935..101400059,101401273..101401336,101401615..101401751,101404662..101404772,101405326..101405556 |
Genome context |
|
Sequence |
000001 TTTCGCCATC TTTTGTCTTT CCGTGGAGCT GTCGCCATGA AGTAAGCACG ACCCGTGGTT CCCAATCCGC TTACATCCTC 000080
000081 GGGCAGAACT CCTCTCTGTC GTCCCTGGCA TGGCTGTAGA CACCCTCCCT GATGGACTTT CACTTTTTGT TGCAGGGTCG 000160 000161 AGCTGTGCAG TTTTAGCGGG TACAAGATCT ACCCCGGACA CGGGAGGCGC TACGCCAGGA CCGACGGGAA GGTTTTCCAG 000240 000241 TTTCTTAATG CGAAATGCGA GTCGGCTTTC CTTTCCAAGA GGAATCCTCG GCAGATAAAC TGGACTGTCC TCTACAGAAG 000320 000321 GAAGCACAAA AAGGGACAGT CGGAAGAAAT TCAAAAGAAA AGAACCCGCC GAGCAGTCAA ATTCCAGAGG GCCATTACTG 000400 000401 GTGCATCTCT TGCTGATATA ATGGCCAAGA GGAATCAGAA ACCTGAAGTT AGAAAGGCTC AACGAGAACA AGCTATCAGG 000480 000481 GCTGCTAAGG AAGCAAAAAA GGCTAAGCAA GCATCTAAAA AGACTGCAAT GGCTGCTGCT AAGGCACCTA CAAAGGCAGC 000560 000561 ACCTAAGCAA AAGATTGTGA AGCCTGTGAA AGTTTCAGCT CCCCGAGTTG GTGGAAAACG CTAAACTGGC AGATTAGATT 000640 000641 TTTAAATAAA GATTGGATTA TAACTCTA |
Predicted Small Protein
Name | NONHSAT090904_smProtein_254:415 |
Length | 54 |
Molecular weight | 5939.6068 |
Aromaticity | 0.0754716981132 |
Instability index | 62.8226415094 |
Isoelectric point | 6.53363037109 |
Runs | 7 |
Runs residual | 0.0281868384722 |
Runs probability | 0.0123526888233 |
Amino acid sequence | MRVGFPFQEESSADKLDCPLQKEAQKGTVGRNSKEKNPPSSQIPEGHYWCISC |
Secondary structure | LEELLLLLLLLLLLLLLLLHHHHHHLLLLLLLLLLLLLLLLLLLLLLEEEELL |
PRMN | - |
PiMo | - |