NONHSAT091007
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT091007 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
781 nt |
Genomic location |
chr3-:106615738..106616518 |
Exon number |
1 |
Exons |
106615738..106616518 |
Genome context |
|
Sequence |
000001 ATGACCCTCC AAACTCAGGC TTACCACATA GTTAACCCTA GCCCCCTGAC CACTAACAGG AGTCCTTTCA GCACTACTTA 000080
000081 TAACTTCTGG CCTAGCCATA TGATTTCATT TTAACTCAAC TGCCTTCCTG ACTTTGGGCT ACTAACCAAT ACATTAACAA 000160 000161 TATATCAATG ATGATGCGAT ATTATCCGAG AAGGCCCATT CCAAGGCCAC CATACATCAA CTGTTCAAAA AGGCCTTTCA 000240 000241 TACAGAAAAA TCTTACTCAT TATTTCAGAG GTGTTCTTTT TCCGCCAGCT TCTTCTGAGC ATTCTATCAC TCTAGCCCAG 000320 000321 CCCCCACTCC AGAATTAGGA GGATGCTGGC CTCCAACAAG CATCTCTCCC CCTAGCCTCT TAGAAGTCCC TTTTCTTAAT 000400 000401 ACATCTGTTT TACTTGCATC CGGGGTTTCA ATTACTTGGG CTCACCAAAG CTTGATAGAA GGTAATCAAA AATACATACT 000480 000481 TCAGGCACTG TGTATCACAA TTGCCCTAGG CATTTACTTT ACACCTCTAC AAGCCTCAGA ATATTTTGAA GTCCCTTTCA 000560 000561 CTATCTCTGC TGGAGTTTAC AGCTCAACAT TCTTCATAGC CACAGGTTTT CACGGGCTTC ACGTTATTAT TGGATCAACA 000640 000641 TTTCTTACTG TCTGCCTACT CCGCCAACTA AAATTTCAGT ATACATCTAA CTGCCATTGT GGATTTGAAG CCTCAGTCTG 000720 000721 ATACTGGCAC TTTGTAGATG TAATATGACT ATTCCTATAT GTTTCTATCT ATTAACAAGG A |
Predicted Small Protein
Name | NONHSAT091007_smProtein_167:337 |
Length | 57 |
Molecular weight | 6657.7751 |
Aromaticity | 0.125 |
Instability index | 74.9125 |
Isoelectric point | 10.5999145508 |
Runs | 7 |
Runs residual | 0.0282982045277 |
Runs probability | 0.0425593660887 |
Amino acid sequence | MMMRYYPRRPIPRPPYINCSKRPFIQKNLTHYFRGVLFPPASSEHSITLAQPPLQN |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHLLEEELLLLLLLLEEELLLLLLLL |
PRMN | - |
PiMo | - |