NONHSAT091058

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT091058

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1211 nt

Genomic location

chr3-:107560509..107596923

Exon number

8

Exons

107560509..107560866,107560952..107561059,107562523..107562626,107567753..107567965,107575927..107576049,107591815..107591873,107594977..107595033,107596749..107596923

Genome context

Sequence
000001 ATGGCAACAG CAGCGTAGCT GAACATCTTA CGGATGGCCC AGGGCTCCAA AGGCTCGTTT CCTAAGTGAG AGAGAGCCTG 000080
000081 GCTGAAGCTG TATTACCATT CATTCTCCAG CCTCCGAAGT CTCAAAGCAT CACTTCCACC ATACTCTAAC TGTCAAGACA 000160
000161 AACACAAAGG CCCAGAAACT GCCAGACTGT CTTCTGAAGT GGCTATAATA TTTACACTCC CATCAGCAGT GTAGAAGGGG 000240
000241 TCTCACTATG TTGTCTGGAG TGCTGTGGTG GAGTGGAGTG GCTATTCACA GAGCCTGTTC TGCTGGGACA CAGAATCACT 000320
000321 TGCTCCATCT CATACATTGA TGATGATTAA TTTGTATGTG TACCTTCCAA AAAAGATGGT TGTGTTTGAA TGGAGGCCTT 000400
000401 CTGGACAGGA AAATAATCAC ATCCTTCCTG AGATAATGAG CACACAATTG CCTGGATACC TGAAGGAATG GAGACAGCGG 000480
000481 CAGAAAACAC TGCAGAGAGG TGGAAACATC CGTTAATATT TTAAAATCCC ATTACTGCTA CCAACAATAA TAATGGATGC 000560
000561 ATAGAAATAG ATCTGGATTA GCTGAGCTTG AAACAGTCCA TCTCACACAC ACACAAAAGA ATTTCAGATA CAGTGAACCC 000640
000641 ACATGTTGAA GCTTTCTAGT ATAATAAAAA TTTCAACTGT TCTGTTGAAT CATCTGCCTG ATTGGAGGCT ACAGAAAAGA 000720
000721 TGTCATCTTA GGAGTGCTTG CTCTGAGTGA GGCTCATCTT CAAATCTGAA TGACCACAAG GAGATTTGAT TATACATGTG 000800
000801 AACACCTCAG AAGGCACAGC CCACCCAGAA GGCAGACAGA AGAAGCTGCC AGGAAGACTG TGAAATCTTC ATGCCCAAGG 000880
000881 ATCCCTAAAA TTAGGAGCAA CAACCACTTG GCTCAGACGG TTTATGGAGG CAAAGGTTTG GATGGGATTA GAGATTTCTA 000960
000961 AATGTGAGTT CGTGTCCTCT GCCAGACCAC CTTACTTCCA CCATTCCTCA GCAAATCAAG AAAAACAGGA GAAAAGACAT 001040
001041 GCCTTTCCAT AAGTTAAATC TATTCTGTTT TAATTCTATA TTATATCTGC TGTACAACTT CTTTTGTTTG TAACACCATA 001120
001121 TTGTTGCTAG TAACTGGAAA TTAATTTTCA CATGCCTCAG CTTAGAAAAA TAAAAAGCAG CCCTGCATCA ATCCCAAAAA 001200
001201 AAAAAAAAAA A
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Predicted Small Protein

Name NONHSAT091058_smProtein_923:1051
Length 43
Molecular weight 4919.5364
Aromaticity 0.119047619048
Instability index 66.2452380952
Isoelectric point 7.96453857422
Runs 9
Runs residual 0.038125376733
Runs probability 0.0230328367584
Amino acid sequence MEAKVWMGLEISKCEFVSSARPPYFHHSSANQEKQEKRHAFP
Secondary structure LLEEEEELLEEELLEEELLLLLLLLLLLLLLHHHHHHHHLLL
PRMN -
PiMo -