NONHSAT091085
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT091085 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1686 nt |
Genomic location |
chr3+:108106443..108108128 |
Exon number |
1 |
Exons |
108106443..108108128 |
Genome context |
|
Sequence |
000001 GAATCAATGG GAAAATAAAA AGGAAAATCC AGACATTAAA GCAGCATTTC ATGTCATCAA CATGGGTGGC TTCTCCACCT 000080
000081 TCCTCAAAGT AGAATAGCAA ACTTTTAAGT TCCCAAGGTG TTTACCTACT TAGCCACACA TACCATGGGC CCACTTCTCA 000160 000161 GTGGCTTTGA TATACCTAGC ATGGTCTAAA GAAGTGTCAG ACTAACTCAT CTTACAAAAG GAACTGCTTA ATAATAAAAG 000240 000241 AGCTGTGCAA GTAGCTTGTT TCATCTTAAT TAGCCCAAGA TGATGCTTCT GAAGTGCTGT GCTTTCTTAT CTATCCTTCC 000320 000321 TGCTGCAAGG GAAGAAGACT TTGACATCTT TAACAACTCA GCCTCAGGAA CCAGAATCAG GAGTAGCAGA TCTTGCATTG 000400 000401 GCATTGTCAA AGAAGCTGTA AAAATGGGTG CCTAAAATAA ATTTGCCTTT GTATTGGAAT AAGCTGTCAT GTGCAATGTG 000480 000481 AGAGGGCTGG GATAAGCTAT CATGTGCAGT GTGAGATAGC TTACTGTCCA GTGTGAGATA GCTGGAACAA GCTATCATGT 000560 000561 GCAGTGTGAG AGGGCTGGAA AGTGACTTTT AGCATCTGTG TTCAACAGTG GAAATCACAC ATCTACTGTG TGATAGGAGG 000640 000641 ATGCCAGACC CTGGAGGGGA GAAAAATACA GTGCCTCTGC CATCAGAGAA TCTATGTTGA CTGCATTAGA AGGAAAAGGG 000720 000721 AAGCAATGGT TGAAAGTGAA AATGTAGATG ATGATATTTT TACTTTAGAA ATGCATTAGT CACTTGTAAG AAGTCTGCCC 000800 000801 ACCTCTTTTC AATTATTGCT TGAGACCAAT GTTAGTCAAC AGGTTAGATT CAGAAAGCTT CAGAGGTCTC TCTTTAGTAT 000880 000881 TTTGTTTCCA CCTGGCACCA GCAACAGTGT CCTCAGTGGC CTTGAGTGTT TGCGCAACCA GAAAATAGGA GTGGAAATGC 000960 000961 CCCCCGCTGC AATTGAATCA GCATCCCATG TAACCTGCCA GCTGGGTAGC CACCCCGAGC CTCTGCCATT AACTTCATTT 001040 001041 ACACATTGTT CTCACTCAGC CACTCACAGG AAGGCATCTT TATGAAAGCA CTGCAAACAC TATGTGTGAA AAAATCCAGA 001120 001121 TGGTATAAAT AGCTTTTCAC TTCTAATTGC AACTTGCCCC TCACATTTTG TTTCCTGAGA GCTCTGAAAA GAGACCGATC 001200 001201 CAAACCACTA ATAGCACAGG AGCTCTGGGA GGGTGAGTCA GTGTCTACTG CTGAAGGAGA ATAAAGATGA AGAGAGAACG 001280 001281 GCAGGAGTCC CAGAAGGCCA TTTCAGGCTT GAAGGAGTAC CTTTCTGCAG GGTAGTGCCC AGCCAGACAA ACAGGGAATG 001360 001361 GTTTCCTGGA GTACCTGATA GGTCAGCTCT TTGATGCATC GCTCAAGTCT GCGGGCTCCC CTCTGGGCCT CTGCACTGCG 001440 001441 ACGGATTTCA TCCTCCAGTT CACCTTCCAG TTCACGAACC TGCAACCAAA ACGTGACCTC AGACCAGACG CTGCCACCAA 001520 001521 GTCTGGCATT CTATTTGCTG ATTGGCACAA TCATTTGAAA GACAGCAAAG TGTCAAGGGA ACATGCACAC ACTGTTTTTG 001600 001601 GTGCTTAAAC AGGACAGTGT CTCTGGGAAA ACTCTCTCGC CAAAAGTAAG ATCTTTTATG GATTCATAAA AGAACTATTT 001680 001681 AGACTG |
Predicted Small Protein
Name | NONHSAT091085_smProtein_956:1084 |
Length | 43 |
Molecular weight | 4435.9751 |
Aromaticity | 0.0238095238095 |
Instability index | 53.25 |
Isoelectric point | 6.95050048828 |
Runs | 7 |
Runs residual | 0.00949367088608 |
Runs probability | 0.0215131097485 |
Amino acid sequence | MPPAAIESASHVTCQLGSHPEPLPLTSFTHCSHSATHRKASL |
Secondary structure | LLHHHHHLHHHHLLLLLLLLLLLLLLLLLLLLLLLLEELLLL |
PRMN | - |
PiMo | - |