NONHSAT091269
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT091269 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1624 nt |
Genomic location |
chr3-:113950245..113951868 |
Exon number |
1 |
Exons |
113950245..113951868 |
Genome context |
|
Sequence |
000001 ATGTGCCACA TGCAGGCAGA GCTGTCTCCA TCCTCAGAGC CAGAGGCTGG CCCTTCACAG CCTCCAGTCA GGCAGGGGGC 000080
000081 CCTCCGGGGT GGCCTGCTCA TGGACTACAG CCCAGCAAGT GGGGGGGGGG CAGGGGGCAG TGACATCCCC CAGGCTCTAC 000160 000161 CAGGTATTTA TCTTTTCCCC TCCAGCTGGT GCCTCTGAGC TTCACAGGGC CCAGAAGCGA CCAGCCCCAC CCACTAAGGG 000240 000241 TCCTCAGGAG CTGGAGAGGG GCCCTGGGCT GGGGGCCAGA GAGGGACTAC CCCCTGAAGA ACCATCTTCT GTAGGGCTAT 000320 000321 TGGGCCCAGG GGGACTGGGG CTGGGAGTAG GTGTGTCCAG CCACCATTTC TCCCACCGTG GCCTCTGTGT TGTGGAACAG 000400 000401 GGAAGTAGTG CCACCTCTTC TTGGACTTCA GGGGCCTGGA GTCCCTCCTG GCCCCGATCA TATGCTTCCT GAAATACTTT 000480 000481 ACACACCAGA GACTAGGCTT TCCCAGACCC AGGGGGACAG GGGTCCCTAG GGGAGTCCCC AGGGCCAGCC CTCTGGGCCA 000560 000561 GCTACACACG CTGGACACTG ATTTGCAGTT TTGCACAAAT AAGGGGTAAG AGCCCAGTGG CTAGGGTGGG CAAGAGGGGG 000640 000641 AGCCTCTGGC CTAGGGAGTC CCCTGGCATT GACAGTGGGC ACAGTCCCAA GCACACACCC CCAGCCCTGG ACCTCCAGGC 000720 000721 CCCTGCCCCA CCAAGCAAAG GCTGCTTCTG CTGGAGAAGC CCCAAATGTC AGTTCTAAGG AAGAGGGTCC AGCCCTTTGG 000800 000801 ACGTGCCAGG GAACCCTGGG CCACCCTACT GCTACCAACA GTTCTGATGC TCAAACCACA CCCATCTGGA GCCACCTGCT 000880 000881 GCCTGGGCCC AAGGAGCCTG TTTTGGACCC AACAGACTGC AGTCCCATGG GGCGGAGGCT GACAGGTGCC CATCACCTGA 000960 000961 AGCTGAGCCC ACTTTGAAGC CTCTGGAAGG GGCCAGGCCT GCTGAGCCCC CGTAGTGCCT CCCCTGTTCC TACCCCTGCT 001040 001041 ATCAGCTGTA CCCTGCTGGG CAACTTTGAG GAATCATTGC TGCAAGGACG CTTTGCACCA TCTGGCCACA TTGAGGGCTT 001120 001121 CACAGCAGAG ACTGGAGCTA GTGGGTCCTA CTGCCCCCAC CATGTCACAC TGCCTGTCAC TGTCACCTTC TTTGAGGTTT 001200 001201 CTGAGCAAAA TGCCCCCACC CACTTCCTGG GCTTTGTGGA TCTGAACCTC CTGGGGAGGA AGAGTTACAG CGTGCCCAAA 001280 001281 GTGGGCACCA CACAAGTAAC ATTTAACCCC AACCAGACTG TGGTGAAGAT GTTCCTGGTG ACCTTTGACT TCTTGGACAT 001360 001361 GGCTGCTGCC ACATGCCCTT ATTGTGCCAT TGCCTCTTTT TGGTGCCTGT GGGTGAGGAG AAAAATGCTA ACCCCACCTA 001440 001441 CTGCCTCCTC TGCTACTCGC TGCACCTTGG GTTCTGGAGC TCCCGCTCAG GCCTCTTAAG CCTGAATGGA GATCTCTGCC 001520 001521 AGCTTTTTTC CTGCTAGAGC CTGGAGCTGG ACGCAGGGCT CCCCTGCGAA CTTCAGGCTG TGACTGGGGC CCCTCTTAAC 001600 001601 CCACGTTATT CACTTTTGCC CTGA |
Predicted Small Protein
Name | NONHSAT091269_smProtein_1328:1498 |
Length | 57 |
Molecular weight | 6036.0564 |
Aromaticity | 0.125 |
Instability index | 57.2732142857 |
Isoelectric point | 8.50396728516 |
Runs | 7 |
Runs residual | 0.0282982045277 |
Runs probability | 0.0292224998107 |
Amino acid sequence | MFLVTFDFLDMAAATCPYCAIASFWCLWVRRKMLTPPTASSATRCTLGSGAPAQAS |
Secondary structure | LEEEELLHHHHHHHLLLHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLL |
PRMN | LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | ooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiii |