NONHSAT091277
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT091277 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1622 nt |
Genomic location |
chr3+:114070651..114108012 |
Exon number |
8 |
Exons |
114070651..114070803,114074900..114075028,114076015..114076074,114085543..114085728,114085814..114085875,114106270..114106426,114106518..114106622,114107243..114108012 |
Genome context |
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Sequence |
000001 CGAGCACGGA ATTGCTGAAG TTGTGAAGGT TGATGCTGTG AATGCGCTCG GTCATCCCCT TGCAACTGAT GTCACCTGCA 000080
000081 GCATGTCAAC GCAGACACAA AACAGGGCAT GGGTCAGATC TAGCTGGTTG CATTCCTAAC ACCTAGGTTT CAGAGTAAAA 000160 000161 ATACAGAGTC AGCTTGTGAT GGCATTCCCT CAAAACATGG AAGGAATTGC AGTAATGAAA GTCATCATGT ATTCTAAGAG 000240 000241 ACTGTTCTGC GAGAGCACAA CACAGACGGG GCTAAAGCAG GGATTGTCTA AGCCCAGTGT GGAGGAACCA TCAAGGATTT 000320 000321 CAGCACGTTT TTTTAGCCAT TGTGAGAAGC AAAAGTGCTC AGGAGTTAAG AGAAGCAGAC GTCCGAAATT ATCTCCATGC 000400 000401 ATTACCAAAA ACCGTGGGCA CCACGGCACG GGGAAAACTT ACCAGGTACA ATGAGCCAGT GACTGTTACT GAATTTCTTA 000480 000481 AGATTACACT TTTCCCAACT ACTGCAGACT GCTTCAGAAT AGAAGAAGAC AACTCTCATG CCATCAAGCC GACGGACTTT 000560 000561 CAAAAAAATA AAAGATGCAT TTCTTTACTT GGCCCATGAG AAGTAAAAGC AGGCACTGGC ATTCTGCACA GATGAAATAC 000640 000641 TTCCTACGAC AGGAATACAT GCTCACTTGT GGACTTCTCT GTAATCTGTA GGCAACATCA GCTCCTGATT TCTAGGTCTG 000720 000721 GATCTGGGTT CTCTGTAGCA CAGGAAGCAT AGTTACTCTG TGATGAAGAA AAACTCAGAA AACTATCCAG ATGTGGGAAT 000800 000801 TTCTCGGGTA TTCCTTGCAC TTGAACTTAA GGATGAATGA AGGTATATAC AAGTCTCTAC TTCTCCTACA TAAATGCCTT 000880 000881 GCATGGCGGG AACTAAATCA ACTACACAGA CCCATACATC CAGAGAGCAG AGGTGAGCTG GATACAAGTG GCTTAGAGAT 000960 000961 GTGGTGGAAG GAGGCCAGAG CTCCAAGGGA AGGGCAGCAA GGAGACAACA GCATGGGTTG CAGCTCAGAC AACAGGTAAA 001040 001041 TAAAACCAAG CAAAGCTGCT GGTCACAGAT TTGACCAGGG TGGCAAGAAA TGACAAGCTA CCATGAGATT CAACAGTGGC 001120 001121 ACGGAAGGAT GATGAGAAGC AAACAGATTA GGAGAAGCTG CCACCACCGT ACATAGAGGC ACAGATGACC AAGCAGAACA 001200 001201 GCACCAGTCC CTGCAAGGTG TGCTCAGATA CAGCTCAGCA CAGCCATCTG GCCAGGAGGG AATGATAATG CACATGGTGT 001280 001281 GCACTGCAGC CGGGAAGTTG AGAACCGCTG TGGGCACCTC AGGACTGAGT CTGGTTACCC TGCTGATCCA AGAAATGAAG 001360 001361 CCATCTAAAA TTTTGCCTGC TTTCACAATT TTCTGTGTGT GTGTGTGTGT ATTAAACAAA GTGAACTAAG AAGCCTTTTA 001440 001441 TTGGAGACAT AATGTACTCA CAGTAGTTTC AAAATCAATG GTGTCACTCT TCAGGTAAAT TACTCCAAGG CTTGGGCCTA 001520 001521 GTGCAGATGT TCATTGGGGC AGGGAGCAGA GAGCGGCTGC ATCTAGATCA GACAAAAAAC AAAAATAAGG TTGTTAAATG 001600 001601 AACAGGTGAT GGTGATGGCA AT |
Predicted Small Protein
Name | NONHSAT091277_smProtein_41:145 |
Length | 35 |
Molecular weight | 3647.2414 |
Aromaticity | 0.0 |
Instability index | 91.9558823529 |
Isoelectric point | 9.68841552734 |
Runs | 5 |
Runs residual | 0.0390915860015 |
Runs probability | 0.0307189542484 |
Amino acid sequence | MRSVIPLQLMSPAACQRRHKTGHGSDLAGCIPNT |
Secondary structure | LLEEELLLLLLHHHHHHHHLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |